Paenibacillus durus: PDUR_00040
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Entry
PDUR_00040 CDS
T03297
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pdu
Paenibacillus durus
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdu03032
]
PDUR_00040
03400 DNA repair and recombination proteins [BR:
pdu03400
]
PDUR_00040
Enzymes [BR:
pdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PDUR_00040
DNA replication proteins [BR:
pdu03032
]
Prokaryotic type
DNA Topoisomerases
PDUR_00040
DNA repair and recombination proteins [BR:
pdu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PDUR_00040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTase_sub_bind
WDR55
Motif
Other DBs
NCBI-ProteinID:
AIQ10601
UniProt:
A0A089HF85
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All DBs
Position
7845..10373
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AA seq
842 aa
AA seq
DB search
MAEQNNPQIRDRDIGVEMRDSFMDYAMSIIVSRALPDVRDGLKPVHRRILFAMSELGMSP
DKPYKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSMRYMLVDGHGNFGSIDGDMAAA
MRYTEARLSKIAMEMLRDLNKETVDFIPNYDGEEHEPAVLPSRFPNLLINGVSGIAVGMA
TNIPPHNLGEVIDGVQAMIRNPEITPMELMEYIKGPDFPTAGYILGREGIRQAYRTGRGS
VTMRAKALIEEENNGKARIVVNELPYQVNKARLVEKIAELVREKRIEGITDLRDESDRNG
MRIVIEVRRDVNANVVLNNLYKHTSMQSSFGINMLAIVGNEPKVLNLRDVLYHYLQHQIE
VIRRRTEFELKKAEARAHILEGLRIALDNLDEVIALIRASRTVDIAREGLIETFSLSVEQ
AQAILDMRMQRLTGLERDKIENEYNELLAKIAEYKAILADESLVLEIISNELQELRDRYA
DERRTEITIGEESILDEDLIPREEVVITVSHTGYIKRLPVSTYRSQKRGGRGVVGMDTKD
EDFVEHLFVSNSHNYLMFFTDKGKVYRIKAYEIPELGRTARGTPIINLLQIEQGEKISAV
IQIEETDSDKYLFFATREGIVKKTPLEDYNNIRKGGLIAINLREEDELIDVKLTDGKQKL
ILGTADGMSITFSEEDVRSMGRSATGVKGITLDEEDHVIGMDCIDQDLDVLIVTTKGYGK
RTPAGDYRLQTRGGKGIKTINLTEKNGPVVSLKVVKQEEDLMIITTGGTLIRMSMDGIST
MGRYAQGVKLINIRDEDAVSTVCRTDKSEDGDENTLSDETAEVNETADSAESNTEDDGEA
LE
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacaaaataacccgcaaatcagggaccgggacatcggtgtggaaatgcgcgat
tctttcatggattacgcaatgagcatcattgtaagccgggctttgccggacgtaagggac
ggacttaagccggtgcaccggcgcattttgtttgcgatgtcggagcttggaatgtcaccg
gataagccgtataagaaatcggcgagaatcgtcggtgaggtaatcggtaagtaccatccg
cacggcgactcggccgtttatgaaacgatggtccggatggcccaagatttctccatgcgc
tacatgctggtcgacgggcatggcaatttcggctcgattgacggcgatatggccgcggcg
atgcggtataccgaagccagactttccaagattgccatggaaatgctgcgcgatctgaat
aaagaaacggtcgattttatacctaactatgatggtgaagagcatgagcccgccgttctg
ccttcacgtttccccaatctgctgattaacggggtatccggtatcgcggtagggatggct
accaatattccaccgcataatttgggtgaagtcatcgacggcgtacaagcgatgatccgt
aatcccgaaattacgccgatggagctcatggaatatatcaagggcccggattttcctacg
gccggttatattttgggccgcgaaggcatccgccaggcgtatcgtacgggccgcggttcg
gtcacgatgcgcgcaaaggctttgattgaggaagagaataacggcaaggcacggatcgtt
gttaacgagctgccttatcaggttaacaaagcacggttggtggagaaaattgccgagctg
gttcgtgagaaacggattgaaggcatcaccgatctgcgggatgagtcggaccgcaatgga
atgcgcatcgttatcgaagtcagacgggatgttaacgcgaatgtagtgcttaataatctg
tacaagcacacctcaatgcagtcttcattcggcatcaatatgctggccattgtcggcaat
gagccgaaggtgctgaatctgcgcgacgtgctgtaccactatttgcagcatcagatcgag
gttatccgccgccggacggaatttgaactgaagaaggcggaagcccgggcgcatattttg
gaaggattgcgcatcgcgctggacaacctggatgaagtcatcgcgctgatccgcgcttct
cgtacggttgatattgcgcgtgaaggcttgattgagacgtttagtctcagcgtggagcag
gcccaggcgattctggacatgcggatgcagcgtctgaccggtctagaacgcgacaagatc
gagaacgagtacaacgagctgctagccaaaatagcagagtacaaggcgatcctggctgat
gaatcgcttgtgctcgaaattatcagcaatgaattgcaggagctgcgggaccggtacgcc
gacgagcggcggacggagattaccatcggagaagagagcattctcgatgaggatcttatc
ccgcgcgaagaggttgtcattacagtttcgcataccggctacattaagcggcttccggta
agcacttaccgcagtcaaaaacgcggcggacgcggcgtagtgggcatggacacgaaggat
gaggattttgtcgagcatctcttcgtcagcaactcccataattatctgatgttctttacc
gataaagggaaggtataccgcatcaaggcctacgagattccggagcttggacggacggcg
cgcgggacgccgattattaatctgctccagatcgagcagggtgagaagatcagcgccgtc
atccagatcgaggaaacggacagcgataaatatctgttctttgccacccgcgaaggaatt
gtgaagaagacgccgcttgaggattacaacaatatccgtaaaggcggactcatcgcaatc
aatctgcgggaagaagatgagctgatcgatgtgaagcttaccgacggcaagcagaagctt
attttgggcacggcggacggaatgtctattaccttctccgaggaggatgtccgttcaatg
ggccggagtgcaacaggagtcaaaggcattactttggacgaagaggatcatgttatcggc
atggattgcattgaccaagatctggatgtgctgatcgtcacgaccaagggttacggcaaa
cgtacgcctgccggcgattaccgtctgcagacccgcggaggcaaggggatcaagaccatc
aatcttacggagaagaatggccctgtggtcagcctcaaggtcgttaagcaggaagaggac
ctgatgatcattacgacgggcggaaccttgatccgtatgagtatggacggcatttcgacc
atgggacgctatgcgcagggcgtgaagctgatcaatatccgcgatgaggatgccgtatct
accgtctgccgtaccgacaagagcgaagacggggatgaaaatacgctgtctgatgagact
gcggaagtcaatgagactgctgattctgccgagtctaatacggaggatgacggagaagct
ttggaatag
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