Paenibacillus durus: PDUR_00640
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Entry
PDUR_00640 CDS
T03297
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pdu
Paenibacillus durus
Pathway
pdu03030
DNA replication
pdu03430
Mismatch repair
pdu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PDUR_00640
03430 Mismatch repair
PDUR_00640
03440 Homologous recombination
PDUR_00640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdu03032
]
PDUR_00640
03400 DNA repair and recombination proteins [BR:
pdu03400
]
PDUR_00640
Enzymes [BR:
pdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PDUR_00640
DNA replication proteins [BR:
pdu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PDUR_00640
DNA repair and recombination proteins [BR:
pdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PDUR_00640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
DnaX_C
AAA_30
RuvB_N
TIP49
RCF1-5-like_lid
AAA_22
AAA_5
AAA_19
AAA_16
AAA_assoc_2
AAA_14
Rad17
B12-binding_2
Mg_chelatase
DUF6395
AAA_lid_RFC1
AAA_2
RNA_helicase
DUF815
PIF1
TsaE
Motif
Other DBs
NCBI-ProteinID:
AIQ10708
UniProt:
A0A089HJX9
LinkDB
All DBs
Position
132397..134151
Genome browser
AA seq
584 aa
AA seq
DB search
MEHIALYRAWRPQAFQDMVGQQHIIQTLQNAIREQRVSHAYLFSGPRGTGKTSAAKVLAK
AVNCERGPGPEPCNECPSCLRIASGAVMDVQEIDAASNRGVEEIRDLRDKVKYAPTEVRR
KVYIIDEVHMLTTEAFNALLKTLEEPPAHVMFILATTEPHKLPATIISRCQRFDFRRVSL
EEQTNRLKVICEKEGISAEDDALQYIARLSDGGMRDALSVLDQISSFTDGHVTYQQVLGM
TGGIPAEQFARLAKAILESDMGRLLELVEQLMHEGKSADKCLENLLYYFRDLLMIKMVPG
SAALTDRVLSPEEFRDMAAAFSRERLFDIVDTLNRYLGEMKYATHPQTLFEVALMKLCSP
QEKESSSGMQAHISGGAIPVDHGELDVLKRQIAALEKKLEQALQAGGVSGTGRESAHSKS
AGSRASAAPRVSSTSKLPPQMDKFIAGKDSGDFANAYKQWSQVLQAVKEEKVTVHAWFVD
GEPVSMTDDAVLVAFKNTIHRETTEKPANKQVIERVLETRLGKPYRLVTVMLRDWNEASA
KSAQPAPKEELRLEHEHEAGEAAKEPWIDEAIQLFGEDLIVIKD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
ttggaacacatcgcgttgtaccgtgcctggcggcctcaggcgttccaggacatggtcgga
caacagcacattatccagacgcttcagaacgcgattcgcgagcagcgggtttcacacgcc
tatctgttcagcggccctcggggcaccgggaagacgagtgccgccaaagtattggccaaa
gcggtcaattgcgagcggggaccgggaccggaaccgtgcaatgaatgtccttcgtgctta
cggattgcttcgggcgcggtgatggatgtgcaggaaatcgacgctgcatccaaccggggc
gtggaggaaattcgcgacctgcgggataaagtgaagtacgctcctaccgaggtgcggcgt
aaagtgtatattattgacgaagtgcatatgctgactacggaggcgtttaatgcccttctg
aagacgctggaggagccgcctgcacatgtcatgttcattttggcgacaacagagccccat
aaactgccggcgacgattatatcacgctgtcagcgctttgatttccgcagagtttcgctg
gaggaacagacgaaccggctgaaggttatttgcgagaaggagggcatttccgccgaggat
gatgcgctgcagtacattgcccgcctgtcggacggagggatgcgcgatgcgctcagtgtc
ctggatcaaatctcttcctttaccgacggacatgtaacctatcagcaggtactcgggatg
accggcggtataccggcggagcaatttgcccgcctggctaaagccattttggagagcgat
atggggaggctgcttgaattggtcgagcagctgatgcatgaagggaagagcgccgacaaa
tgcctcgaaaatttgctgtattacttccgcgatctgcttatgatcaagatggtgccgggt
tcggccgcgctgactgaccgtgtgctgagtccggaggaattccgggacatggctgcggcc
ttctcgcgtgagcggctgttcgacattgtagacacgctgaaccgttatttaggtgagatg
aaatatgccacgcatccgcagacgttgtttgaggtggcgcttatgaagctctgcagtcca
caggagaaggagagcagctctgggatgcaggcacatattagcggcggtgctataccggtc
gatcatggagagctggatgtgctcaagcggcaaattgccgctctggagaagaagctggag
caagcgcttcaggccgggggtgtgtctggaactggcagggagagtgctcattcgaagtcg
gcgggtagccgtgcttccgccgctccgcgcgtatcctccacctctaagcttccgccgcaa
atggataaattcatagcaggcaaggacagcggggattttgcaaacgcatataaacaatgg
agtcaggtgcttcaggcggttaaggaagagaaggtaacggttcacgcctggtttgtcgac
ggtgaacccgtatcaatgaccgacgacgcagttctcgtggcgtttaagaatacgatacac
cgggaaaccaccgagaagccggctaacaagcaggttatcgaacgtgtactggagactcgt
ctgggcaagccgtaccgtttagtcactgtcatgcttcgggattggaatgaagcctccgcg
aaatcggcgcagcctgcgcctaaggaagagcttcgcctggaacatgaacatgaggccgga
gaagccgccaaggaaccctggattgacgaggccattcagctttttggtgaagacctcatt
gtcatcaaagattaa
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