Paenibacillus durus: PDUR_01545
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Entry
PDUR_01545 CDS
T03297
Name
(GenBank) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdu
Paenibacillus durus
Pathway
pdu03420
Nucleotide excision repair
pdu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PDUR_01545
03430 Mismatch repair
PDUR_01545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdu03400
]
PDUR_01545
Enzymes [BR:
pdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PDUR_01545
DNA repair and recombination proteins [BR:
pdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PDUR_01545
MMR (mismatch excision repair)
Other MMR factors
PDUR_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_30
AAA_12
DUF6953
Motif
Other DBs
NCBI-ProteinID:
AIQ10847
UniProt:
A0A089HIB0
LinkDB
All DBs
Position
complement(313408..315963)
Genome browser
AA seq
851 aa
AA seq
DB search
MDKLLYHPVPKGASGTRVPQAAAASAKTSRELVRGDEPDAGYFRTLEQEGILLNASQIAA
VRHGDGPLLTLAGAGSGKTSVLVCRTGYLLSVRRVPSGRLLLLTFSSRAAAEMRERIGRL
PGIGGRDISGLQARTFHSFFLYFLRRQGASQEIFHDTRRQHILLKAIMRELGLPKDAYPP
ESLLSLLSSCKMNMGGVDTLPQLTNADKEIKEILQRYEQWKQDNGKIDFDDVLLHAYRML
LERPELLAELQRKYTYIMVDEFQDTNMLQYELIRMIARPLNNLMVVGDDDQTIYSFNGAR
SEFILEFEKLYPEAKVITLDINYRSGPAIIGLGNGIIRGNTRRRSKTLRAAAQGGSQPRY
LRPYTADEEAEAIVEYIASAVEQGARSYGDFAVLYRASSSSRAVLERLLLRDIPYIDYGE
GQLLYEHWLIAPVISHLRLTVNRRDFAAIEDMLPTLYVSREQGMGHIQRMEAVQPKRGPL
IHLLSLPGLAEFRQASIRERLDMLRHLRELTPLQAIRQIRSRFYDQFVLADERHQATLHR
ETLKEMLDELELSAGRFGSIPLFLDFLDEITSRNEQHRTPGGTEQETQVALMTIHKSKGL
EFPVVMLLGASEGILPHSSALEAGRLKDRQTAEGGGEALALLEEERRLAYVAVTRAKEEL
FISSPAMHRGRKAPVSRFMLAAFGVGAADAADAGVRGGRQGARPGGGTASGPGSGSGGSG
FGAANASAARGSGGTATEPGSGSGGRGGRAASAGAARGSGAGSGYGAARDGRTGAGIGGA
GSFGGLRRSGGVAHAAAPSGRTRTVAVWSCPAAACPGWMRVKAGGAEDHLAHKPCPLCGT
PMERGTRDVPV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggacaaactgctgtatcatcctgttccgaagggagcttccggaacccgcgtgccgcag
gcggcggcagcttccgccaagacgagccgggaactggtgcgcggagatgagccggacgcc
ggttatttccggacgctggagcaggaaggcattctgctgaacgcttcgcagatcgcggcg
gtacggcatggcgacggcccgctgctgacgctggcgggggccgggtccggcaagacaagc
gtattggtatgccggaccggctatttactgtccgttcgccgcgttccttctggacgtctg
ctgctgctgacgttctccagcagggcggcggcggaaatgcgggagcggatcggcagactg
ccgggaatcggcgggcgggatatttcggggctgcaggcacgcacgtttcattcttttttt
ctgtattttctacgaagacagggggccagccaggagatattccacgatacgcgccgccag
catattctgcttaaagcgattatgcgcgagctgggcctgcccaaagacgcgtatccgccg
gaaagcctgctttctctcctctcgtcctgcaaaatgaacatgggcggcgtagacaccctt
ccccagcttacgaacgcggataaggaaatcaaggagattctacagcgctacgagcagtgg
aagcaggataatggcaaaatcgatttcgacgatgtgctgctgcatgcctaccgaatgctg
ctggaacggccggagctgcttgctgaactgcaaagaaaatacacatatattatggtcgat
gaatttcaggatacgaatatgctgcagtatgagctgatccgcatgatcgcccgtcccctg
aacaatctgatggtggtcggcgacgacgatcagacgatctattcgtttaacggggcgagg
agcgagtttattctggagttcgagaagctgtacccggaggcaaaagtgattacactcgac
atcaactaccgttccgggcccgccatcatcggccttggcaacggtattatccggggcaac
acgcggcggcgttccaaaacgctgcgcgcggcggcgcaaggcggcagccagccccggtat
cttcgcccttacaccgccgacgaggaagcggaagccatcgtggagtatatcgcttccgcc
gtagagcagggagcgcggagctatggcgatttcgccgtgctgtaccgggcatccagcagc
agccgcgccgtgctggagcggctgctgctgcgagatattccctacatcgattacggcgaa
gggcagctgctgtacgagcattggctcatcgcgccggtcatcagccacttgcggctgacc
gtgaaccggcgcgattttgccgccattgaggacatgctgcccacgctctatgtaagccgg
gaacaggggatggggcatatccagcggatggaagcggttcagccgaagcgggggccgctg
atccatctgctgagcctgccgggactggcggaattccgccaagcttccattcgggagcgg
ctggacatgctccgccatctgcgggagcttacgccgcttcaggcaatccggcagatccgc
agccggttctacgatcaattcgtcctggcggacgagcgccatcaggcgacgctgcaccgg
gagacgctgaaggagatgctggacgagctggagctgtcggcgggacgcttcgggagcatc
cctctttttcttgattttctggacgagataacgtcaaggaacgagcagcaccggactcct
ggcggtacagagcaggagacccaagtcgccctgatgacgattcataagtccaaagggctc
gaattccccgtcgtcatgctgctcggcgcgtccgaaggcatcctgccgcacagctcggcg
ctcgaagcgggccgcctgaaggaccgccagacggcggaaggcggcggagaagcgcttgcg
ctgctggaagaggagcgccgcctggcgtatgttgcggtcacccgcgccaaggaagagctg
ttcatcagctcgcccgcgatgcaccggggccggaaggccccggtctcccgcttcatgttg
gcggcgttcggcgtcggcgcggcggacgcagctgacgctggcgtacgcggcgggcggcaa
ggggcccggcccggcggcgggaccgcgtccgggccgggcagcggctccggcggcagcggc
ttcggcgcggcaaacgccagtgccgcgcgcggaagcggcgggaccgcgaccgagccaggc
agcggctccggcggcaggggtggccgcgcggcaagtgccggtgctgcgcgcggaagcggc
gcgggcagcggatatggcgcagcccgcgatgggcgcactggcgccggcataggcggcgcc
ggcagcttcgggggcctccgccgctcgggcggcgtagcccatgcagccgccccctccggc
cgcacgcgcacggtcgcggtctggagctgcccggccgctgcctgcccaggctggatgcgc
gtcaaagccggcggcgccgaggaccatctggcgcataagccctgcccgctgtgcggcacg
ccgatggagaggggcacccgggatgttccggtgtag
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