Paenibacillus durus: PDUR_06165
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Entry
PDUR_06165 CDS
T03297
Name
(GenBank) hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pdu
Paenibacillus durus
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdu03016
]
PDUR_06165
Enzymes [BR:
pdu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PDUR_06165
Transfer RNA biogenesis [BR:
pdu03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PDUR_06165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AIQ11579
UniProt:
A0A089IRB5
LinkDB
All DBs
Position
1306942..1307502
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AA seq
186 aa
AA seq
DB search
MFTAVRLSPELRGAVGGMCRSLSRELSFAKWTHEEDYHITLQFLGDTDPRSIPDLVSVLK
GAAADCRPFTLSLQETGIFGPPAAPRVLWAGVGGETDRLQELHSRIVAATLPLGFRAEER
AYKPHVTLARKYRGERAFDPGYLHAFKQEADALDMSWRVEEWVLFVTRMHKKPMYEIVET
LTISKK
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
ttgttcactgcggtgagattgtcgcccgagcttcgcggggccgtaggcggcatgtgccgc
agcctttcacgggagctgtcctttgccaaatggactcatgaagaggattatcatataacg
cttcagtttctgggcgataccgacccccggtccattccggatcttgtgtcggtgctgaag
ggggcggcagcggactgtaggccgttcaccttgtctttgcaggaaacaggcatcttcggg
cctccggccgctccgcgtgtcctgtgggcgggagtgggcggtgagacggacaggctgcag
gaattgcatagccggatcgtggcggctacgctgccgcttgggtttcgcgccgaggagcgc
gcttataagccccatgtgacgctggctcgtaaatataggggagagcgtgcttttgaccca
ggatatcttcatgcgtttaagcaggaagcggatgcacttgacatgtcctggagagtcgag
gaatgggttctttttgttacgcgaatgcacaaaaaaccgatgtatgaaattgtcgaaaca
ttaacaatttctaaaaagtag
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