Paenibacillus durus: PDUR_09785
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Entry
PDUR_09785 CDS
T03297
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pdu
Paenibacillus durus
Pathway
pdu03030
DNA replication
pdu03430
Mismatch repair
pdu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PDUR_09785
03430 Mismatch repair
PDUR_09785
03440 Homologous recombination
PDUR_09785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdu03032
]
PDUR_09785
03400 DNA repair and recombination proteins [BR:
pdu03400
]
PDUR_09785
Enzymes [BR:
pdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PDUR_09785
DNA replication proteins [BR:
pdu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PDUR_09785
DNA repair and recombination proteins [BR:
pdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PDUR_09785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AIQ12179
UniProt:
A0A089IT37
LinkDB
All DBs
Position
2090592..2094239
Genome browser
AA seq
1215 aa
AA seq
DB search
MSPFVHLHVHSEYSLLDGAARIADLVRRAGEHGMKSLALTDHGVMYGVIPFYKACKENGI
KPIIGCEAYLTAGSRRERGSRKDQPIYHLILLARNEEGYRNLMRLVSIGQLEGYHYKPRI
DMEALAAHAEGLICLSSCLGGEVPQHLLHGRDGEAKKAALRYKEIFGEYFYLELQDHGMP
EQKRVNPKLIALAEETGIPLVVTNDVHYLSREDSEVQDVLICIGTGKTVDDEERLRIGTD
QLYLKSGEEMAALFPHVPEAIANTAVIADQCNLELEFGKHILPAYSPLPEGLDAAAYLRR
LCEAGLQERYKDTPRWESEEGRKLAEERLAYELGVIETMGFSDYFLIVWDFIAFCHRQDI
ATGPGRGSSAGSLTAYCLRITDVDPLKYNLLFERFLNPERITMPDIDIDFSDERRDEVIS
YVADKYGEEHVAQIITFGTLAARAAVRDVGRALNLPYGEVDKAAKLIPGTLGISIARALE
SSPDLKALYQGNPKTRDLLDMAMKVEGMPRHASTHAAGVVISRGPLTDAVPLQEGNEGAA
LTQYSMEHLESIGLLKMDFLGLRTLSIIERCMNWIGQMTGSAPDFREIPDDDEATYAMLG
HGETTGVFQLESAGIRRVLKDLKPTVFEDIISVLALYRPGPMEFIPKYIQGKHGLAEVEY
PHPDLIPILSDTYGIIVYQEQIMQIASGMAGFSLGEADLLRRAVSKKKRETLDRERGHFV
RGSLKHGYGEADANAVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVQFMASMLT
AVTGVHRKVAEYVLECRRMGIGVLPPDVNDSGVLFTPVDGGSGAGGHIRFGLAAIKNVGT
LAVESILEARKERPFDSLLDFCRRVDLRVCNKRVVESLIQAGAFDGLPGHRAQLLAMLDE
TVDAAAKWRKEREELQIQLFDDLVEMPNWDIRYPDIPKFTAGQQLELERELLGLYLSGHP
LDDFAELLEEPGISRLMDLGEAPDESVTVTAGMVVSVKEIMTKAGKAMAFVEWEDQIERC
EVVLFPEVWKRSRALVAKGALLALRAKVQQQDEGFKLLADEVAQLSPETLRGLLQRRAAM
AARPQGHGRAAPAGPGAAAAPAVAHGLAAGRSRSAGPQGGPQAPARAARPAAAQPADRPA
GQRAYIKITAASEAGGLLPQLKELLQRHPGAVPTLLFYEREQKLIALSDSFRIKPSPELF
GLVESVLGPGTIRIK
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctttcgtgcatctgcatgtgcacagcgaatacagtttattggacggggcggcg
cgcattgccgatctggtgcgccgggccggcgaacacggcatgaagtcgctggcgctgacc
gatcacggagtgatgtacggggtgatccctttttataaagcgtgcaaggagaacggcatc
aagccgatcatcggctgtgaggcttacctgacagcaggatcgcgccgcgagcgcggcagc
cgcaaggatcagccgatctaccaccttattctgctcgcgaggaacgaagaaggataccgc
aatctgatgagactcgtctccatcggccagctggaaggctatcactataagccaagaatc
gacatggaagcccttgccgcgcacgcggagggccttatttgtctaagctcctgccttgga
ggagaggtgccccagcatctgcttcacggacgggacggggaggcgaagaaggcggcgctg
cggtacaaagagattttcggcgaatatttctatctggagctgcaggatcacggaatgccc
gaacaaaaaagagtgaatccgaagctgattgctctggccgaagagacgggcatccccctg
gtcgtcaccaatgacgtgcattacctgtctagggaggattccgaggtccaggatgtactg
atctgcattggcacgggcaagacggtggatgatgaagaacggctgcgaatcggcacggat
cagctctatttaaagagcggcgaggaaatggccgcgctgtttccgcatgtaccggaggcg
atagccaataccgctgttatcgctgaccaatgcaatctggagctggaatttggcaagcac
atactgcccgcctactctccgctgcccgaaggactggatgccgccgcctatttgcgccga
ctgtgcgaagcgggcctgcaggaacgctataaagacactccccggtgggaatcggaggag
ggccggaagcttgcggaggagcggctggcctatgagcttggtgttattgagacgatgggc
ttctccgattattttctgatcgtctgggattttatcgccttttgccacaggcaggacatt
gcgacagggccgggaagaggctcgtccgcaggcagcctcaccgcctactgcctgcggatt
accgacgtcgatccgctgaagtacaacctgctgttcgagcgctttctgaatcccgagcgg
atcacgatgcccgatatcgacattgatttcagcgacgagcggcgcgacgaggtcatatcc
tatgtggcggataaatacggcgaagagcatgtcgcccagattattacgttcggaactctg
gcggcgcgggctgcagtgcgcgatgtgggacgggcgctgaacctgccctacggggaagtg
gacaaagcggcgaagctgatccccgggacactcggcatcagcatcgctagggcgctggag
agcagcccggatctcaaggcgctgtaccagggcaatccaaagacccgggatttgctggac
atggcgatgaaggtggaaggcatgccaaggcatgcctcgacgcacgccgccggggtcgtc
atatcccgggggccgcttactgatgccgttccgctgcaggagggcaatgaaggggcggcc
ttaacccagtattcgatggagcatttggagagcatcgggctgctgaagatggactttctt
ggccttagaacgctgtccattatcgagcggtgcatgaactggatcggacagatgaccggc
agcgcgccggatttccgggagattcccgatgatgacgaagcgacttatgcgatgctgggc
cacggcgagacgacgggcgtgttccaattggagtcggcgggcattcgccgggtgcttaag
gatctgaagccgaccgtgttcgaggatatcatttcggtgctggcgctgtaccggccgggt
ccgatggaatttattccgaaatatattcaaggcaagcacgggcttgccgaagtggaatat
ccgcatcccgatctgatcccgatcctgtccgatacctacggtatcatcgtctatcaggag
cagatcatgcagatcgcatcggggatggccggattttcgcttggcgaagcggatctgctg
cgcagagccgtatccaagaagaagcgcgagacgctggaccgcgagcgcggccattttgta
aggggaagcctgaagcatggctacggggaagccgacgcgaatgcggtctacgacatgatc
gtgcgctttgccgattacggcttcccccgcgcccatgccgcggcttacggcgtgctggcc
ttccagacggcttacctcaaggcccattatccagtgcagtttatggcttccatgctgacg
gcggtgacgggcgttcaccgcaaggtggcggagtacgtgctggaatgccggcgcatgggc
atcggcgtgctgccgccggatgtgaatgacagcggcgttctgttcacgccggtggacggc
ggcagcggcgcgggcggacatatccgcttcgggctggcggcgatcaagaatgtcggcacg
ctggccgttgagagtatactcgaagcccggaaggagcggccctttgacagcctgctcgat
ttctgccgccgcgttgacctcagagtctgcaacaagcgcgtcgtggaatcgctgatccag
gcgggggcttttgacggcctgcccgggcaccgggcgcagctgctggccatgctggacgag
acggtggacgcggccgccaaatggcgcaaggagcgtgaggagctgcaaattcagctattc
gacgaccttgtcgaaatgccgaactgggatatccggtatcccgatattccgaagtttaca
gcgggacagcagctggagctggagcgcgaactgctcggcctgtatctgtcgggccacccg
ctcgacgacttcgcggagctgctggaagaaccggggatttcgcggctgatggatctcggc
gaagctcccgatgagagcgtgacggttacggcgggaatggtcgtatccgtcaaggaaatt
atgacaaaggccggcaaggcgatggcctttgtcgaatgggaagaccagatcgagcgctgc
gaggtcgtgctgttccccgaggtgtggaagcgcagccgggcgcttgtcgccaagggcgcg
ctgcttgctctgcgcgccaaggtgcagcagcaggacgaaggcttcaagctgctggccgac
gaggtggcgcagctgtcgccggagacgctgcgcggcctgctgcagcggcgcgcggctatg
gctgcgcggccgcaagggcacggccgggccgcaccggccggcccaggcgcggctgctgcg
cctgccgtggcccacggcctggccgcaggccgcagccgctccgccgggccgcagggcggc
ccgcaggctcccgcacgggctgcgcgcccggcggcggcgcagccggcggacagacccgcc
ggccagcgcgcctacatcaaaatcacagccgcctcggaggccggcggcctgctgccgcag
ctgaaagagctgctgcagcgccatcccggagcggttcctacgctcctgttctacgagcgg
gagcagaagctgatcgcgctaagcgacagctttcggattaaaccgtcgccggagctgttc
ggtcttgtcgaatcggtcctaggaccaggaacaataagaataaaataa
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integrated database retrieval system
