KEGG   Paenibacillus durus: PDUR_09910
Entry
PDUR_09910        CDS       T03297                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pdu  Paenibacillus durus
Pathway
pdu03030  DNA replication
pdu03410  Base excision repair
pdu03420  Nucleotide excision repair
pdu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pdu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PDUR_09910
   03410 Base excision repair
    PDUR_09910
   03420 Nucleotide excision repair
    PDUR_09910
   03440 Homologous recombination
    PDUR_09910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdu03032]
    PDUR_09910
   03400 DNA repair and recombination proteins [BR:pdu03400]
    PDUR_09910
Enzymes [BR:pdu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PDUR_09910
DNA replication proteins [BR:pdu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PDUR_09910
DNA repair and recombination proteins [BR:pdu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PDUR_09910
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PDUR_09910
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_polI_exo1 5_3_exonuc HHH_5 HHH_2 DNA_pol_P_Exo
Other DBs
NCBI-ProteinID: AIQ12202
UniProt: A0A089HM67
LinkDB
Position
2118129..2120786
AA seq 885 aa
MDKLILIDGNNVIYRAFFAMPPLTNTAGQQTNAVYGFTTMLLRLIEEHKPTHLIVAFDAG
KVTFRHEGYQEYKGGRQKTPPELSEQFPLLKGLLSDLGVPQFEIENYEADDIIGSISRQA
DEAGRQVMIVSGDKDMLQLASEHTTIALIRKGVTDIELYGPKQIRDKYDLTPQQIIDLKG
LMGDASDNIPGVPGVGEKTALKLLAQFGSVEGVIAGTGELKGKMKEKLEAHADDAIMSKK
LATIYREVPLTHSWEDLAFHGLKKDTAGPALAKLEFKSLLERLSLSGSAPVNEESSSKAV
QLDIVIAGEPELEELTAALTDVKALHVETNGENPHRAEVIGLALSLLERHYFVPFELLKS
GAAAGLRDWLADEHAPKNGYDLHRADLALHWQGIPFAGAAHDVQLAAYLLDPTEANQNLS
DLVAKYGLPRLAPDEEVFGKGAKYKVPELDILGAHVASKSASVLGLVPKQEQDLTETAMS
GLFHDLEMPLSRILADMEKQGIAVNMDGLKELGREFESTISGLVEQIYEIAGTEFNLNST
KQLGEILFDKLGLPVIKKTKTGYSTDAEVLEKLEPYHEIVQKILQYRTLAKLQSTYVEGL
LKEIAPSTGKVHTFYRQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKVFVPSEPGWSILA
ADYSQIELRVLAHISDDARLKEAFLHDMDIHTKTAMDVFGVPAEAVDGNMRRSAKAVNFG
IVYGISDYGLSQNLNITRKEAGRFIEQYFEVFQGVRRYMDEIVREARKAGYVTTLLERRR
YLPEINASNFNLRSFAERTAMNTPIQGTAADIIKLAMIHMDRALFERKLKSRMLLQVHDE
LVFEVPEDELETMKKLVPEVMEGALKLSVPLKAEVSYGSNWYEAK
NT seq 2658 nt   +upstreamnt  +downstreamnt
atggacaagctgattcttatagatggaaataatgtcatttaccgtgcattcttcgccatg
cctcccctgactaatacagcagggcagcagaccaacgccgtgtacggctttactacaatg
ctgcttcggctgattgaggagcataaaccgacgcatctgatcgtcgcgttcgacgcgggg
aaggtcaccttccggcacgaaggttaccaggagtacaaggggggccgtcagaagacgccg
cccgagttgtcggagcagttcccgctcctcaaaggtctgcttagcgacctgggcgtgccg
cagtttgagattgagaactatgaagcggatgatattatcggcagtatctcccggcaggcg
gacgaagcgggacgccaggtgatgatcgtatcgggggataaggacatgctgcagctggcg
tcggagcatacgaccattgcgctgattcgcaagggtgtcaccgatatcgagctgtatgga
ccgaagcagatccgtgataagtacgatttgacgccgcagcagatcatcgacctcaaaggg
ctgatgggcgatgcgagcgacaatattcccggcgtaccgggtgtcggcgagaagactgcc
ctcaagctgcttgcccagttcggctccgtagagggagtgatcgcgggaacaggcgagctg
aagggcaagatgaaggagaagctggaggcgcatgccgacgacgccattatgagcaaaaag
ctggcgaccatataccgtgaggttccgctgacacattcctgggaggatttggctttccat
ggtctcaagaaagacacagccggacctgcgctggcgaagctggaattcaagtcactgctc
gagcgcctttccttgagcgggagcgcccccgtgaacgaagagtcgtcctccaaagcggtg
cagcttgacatcgtcattgctggtgagccggagcttgaagagcttacggccgcgctgacg
gatgtgaaggcgctgcatgtggagacgaacggcgagaacccgcaccgggccgaggtaatc
ggcctggcgctatcgctgctggagcggcattattttgtgccgttcgagctgctgaagagc
ggcgccgcggcgggcttgcgcgattggctggccgacgagcatgcgccgaagaacggctac
gacctgcaccgcgcggacttggcgctgcactggcagggcatccccttcgccggggcggcg
catgatgtgcagctcgcagcatatctgctcgacccgaccgaggccaaccagaacctcagc
gaccttgtcgccaaatacggcctgccgcgccttgcgccggacgaagaagtatttggcaag
ggagccaaatacaaagtgccggagctggacattctgggcgcgcatgtcgcctcgaagagc
gcgtctgtgcttggccttgtaccgaagcaggagcaggatctgaccgaaacagccatgtcc
gggctgttccacgatctggaaatgccgctttcgcgcattttggccgacatggagaaacag
gggattgccgtcaatatggacggtctcaaggagctgggccgggaatttgagagcacgatc
tcgggcctcgttgagcaaatctatgaaatcgcgggcacggaattcaatttgaattcgacg
aagcagcttggtgagattttattcgataagcttggacttcctgttatcaagaagacaaag
accggctattccaccgatgctgaggtgctggagaagctggagccttaccatgaaatcgta
caaaagattttgcagtaccgcacgctcgcgaagctgcagtccacttacgtggaagggctg
ctgaaggaaattgccccgtcgacgggcaaggtgcacaccttctaccgtcagacgattgcg
gcgaccggacggctgagcagccagttcccgaacttgcagaacatcccgatccggctggag
gaaggccgcaaaatccgtaaagtattcgtgccctccgagccaggctggtcgattctggcg
gccgactattcgcagattgagctgcgggtgcttgcgcatatttcggacgacgcaaggctg
aaggaagcctttttgcatgatatggatattcataccaagacggccatggacgtattcggc
gttcctgccgaagcggtcgacggcaacatgcggcgctctgccaaagcggtcaatttcggt
atcgtatacggtatcagcgattatggcctttcccagaacctgaatattacgcggaaggaa
gccggaaggttcatcgagcagtatttcgaggtgttccagggcgtacgccgatatatggac
gagattgtccgcgaagcgcgcaaagcgggctacgtcactacgctgctggaacgccgacgt
tatctgccggagatcaatgcgagcaactttaatctgcgttcttttgccgagcggacggcg
atgaatacaccgattcagggaaccgcagccgatattatcaagctggcgatgatccatatg
gaccgggccctgttcgagcgtaagctgaagagccgcatgctgcttcaggtgcatgacgaa
ttagtgttcgaggtgccggaggacgagctggaaacgatgaaaaagctcgtgcctgaagtt
atggaaggcgcgctgaagctgtcggttccgctcaaggcggaggtaagttatggaagtaac
tggtatgaagcaaaataa

DBGET integrated database retrieval system