Paenibacillus durus: PDUR_11115
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Entry
PDUR_11115 CDS
T03297
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pdu
Paenibacillus durus
Pathway
pdu03030
DNA replication
pdu03430
Mismatch repair
pdu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PDUR_11115
03430 Mismatch repair
PDUR_11115
03440 Homologous recombination
PDUR_11115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdu03032
]
PDUR_11115
03400 DNA repair and recombination proteins [BR:
pdu03400
]
PDUR_11115
Enzymes [BR:
pdu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PDUR_11115
DNA replication proteins [BR:
pdu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PDUR_11115
DNA repair and recombination proteins [BR:
pdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PDUR_11115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
AIQ12404
UniProt:
A0A089ITW5
LinkDB
All DBs
Position
2381570..2382319
Genome browser
AA seq
249 aa
AA seq
DB search
MKEPNKGGGFWNNLRHGGMPSAIASIRGGESAQQTAQQMAFIRSLMREKRRPEVLHTPLS
ELETIVFDLETTGFSSQHGDEILSFGAIKVVGEEVIEDECFYTLVNCQTSIPANITELTG
ITEEMSKAAPSLIDGLHNFMSFVGKRVLVAHASAHDKSFLNAALWKTSKVQLTHRVLDTM
MLARWLEPSRGNYTLDELLTVHGIPICGRHNALEDAKMTAKLWVSYLREISQHKKVETLG
DLYAYLSRT
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagccgaacaaaggcggcgggttctggaacaacttaagacacggcggcatgccg
tctgcgatcgcttcgattcgtggcggagaatccgcacagcagaccgctcagcaaatggct
tttatcaggtctttgatgagggagaaacgccggccggaagtgctgcatacgccgctgtcc
gagctggagaccattgtgtttgatttggaaacgactggattttccagtcaacatggggat
gagattctgtcattcggggcgattaaggtcgtcggggaggaggtcattgaggacgagtgc
ttttacacccttgtcaattgtcagacctccattccggcgaatattaccgaattgacggga
attaccgaagaaatgagcaaagcggcgccttcacttattgacggacttcataattttatg
tcatttgtaggtaaaagagtattggtcgcccatgccagcgctcatgacaaatcgtttctg
aacgctgcgctttggaaaacatccaaggttcagctcacccaccgcgtgctggatacgatg
atgcttgcgcgctggctggagccaagccggggcaattacacgcttgatgaactgctgacg
gtgcatggaatcccgatttgcggaagacataatgcgctggaagacgccaaaatgacggct
aagctctgggtgtcttacctccgtgagatttcccagcataagaaggtggagacactgggc
gacctgtatgcttacttgagcagaacctga
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