Paenibacillus durus: PDUR_11175
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Entry
PDUR_11175 CDS
T03297
Name
(GenBank) RNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pdu
Paenibacillus durus
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdu03009
]
PDUR_11175
Enzymes [BR:
pdu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
PDUR_11175
Ribosome biogenesis [BR:
pdu03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PDUR_11175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AIQ12414
UniProt:
A0A089ITX5
LinkDB
All DBs
Position
2393423..2394178
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AA seq
251 aa
AA seq
DB search
MAKLRDGEGKKQRLDKILSHVGYGSRSELRKQAKQGLITVNGVVQKDSGAHVDPYNDTIE
VAGETVLYREHIYLMMNKPPGVLSATEDKRDRTVLDLLEERYTVFEPFPVGRLDKDTVGL
LLLTNDGQLAHELLSPRKHVPKTYEALVEGEVGPDDVAAFAEGVRLDDGYVTLPAQLTIL
GRERGRQVISQISLTITEGKFHQVKRMFQAVGKKVIFLKRVSMGNLPLDANLPEGACREL
TSEELKLLAEI
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagttaagagacggcgaagggaaaaagcagcggctggataagatactgtcccat
gtcggttacggctcgcgcagcgagctccgcaagcaggccaagcagggcctcatcaccgtt
aacggtgtggtccagaaagacagcggcgcacatgtcgatccctataacgatacaatcgag
gtggccggtgagacggttctttaccgtgaacatatttatcttatgatgaataaaccgccg
ggcgtactgtcggcgacggaggacaaacgggaccggacggtgctggatctgctggaggag
cgctatacggtgttcgagccttttccggtaggcagactggataaagacacggtcggattg
ctgctcctgacaaatgacggacagcttgcccatgagctgctctcaccccgcaagcatgtg
cccaagacctatgaagccctcgtagaaggggaggtcggcccggacgatgtggcagctttt
gcggagggagtaagactggacgacggttatgttactttgccggcgcagctgacaattctg
ggaagggagcgcggaagacaggtcatttcgcaaatctccctgacgattaccgaaggcaag
ttccaccaggtgaaacggatgttccaggctgtcgggaagaaggttatctttttaaaaaga
gtctcaatgggcaatttgcccctggatgcgaatctgcccgaaggcgcctgccgtgagctg
acgagcgaagagcttaagctgctagcagaaatttaa
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