Paenibacillus durus: PDUR_12935
Help
Entry
PDUR_12935 CDS
T03297
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdu
Paenibacillus durus
Pathway
pdu03420
Nucleotide excision repair
pdu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PDUR_12935
03430 Mismatch repair
PDUR_12935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdu03400
]
PDUR_12935
Enzymes [BR:
pdu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PDUR_12935
DNA repair and recombination proteins [BR:
pdu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PDUR_12935
MMR (mismatch excision repair)
Other MMR factors
PDUR_12935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PhoH
AAA_30
SLFN-g3_helicase
AAA_16
DEAD
NACHT
Catalase_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AIQ12709
UniProt:
A0A089IUP6
LinkDB
All DBs
Position
2904469..2906817
Genome browser
AA seq
782 aa
AA seq
DB search
MSINETEWKEEQNRVDRVTGLLKRHIRALSEELGLHRSDVVELRKDFWEEVTVNFSSPDD
LGETSTSLRQQAQVLSERERHHLQSSKALKKYKKLVVSPYFGRIDFAESPEGETERIYLG
IGSLMEDDGTFLIYDWRAPISSLYYDGAPGAASFETPAGTVSGEMSLKRQFVIQDGKIEV
MFDTGVTIGDELLQQVLSHSADDRMKNIVATIQKEQNAIIRNDRSRMLVVQGAAGSGKTS
AALQRVAYLLYKYRGTLQADQVLLFSPNPLFNSYVSTVLPELGEDNMQQTTFQMYLEHRL
GQEFQLEDVFTQTETLLNSPEGPETDARRDGIAYKSSVAFLDVIRGYAFRLEHEGMLFKP
LMFQGQAIVGKEEMERKFYSYDPSIRLANRIDLMTGWLLKKIALFSTEERSAAWVEDQIE
LLDSGEYHRAYQMMRRKQRGKEETFDDFYMEKELLARYVVSQRLKPLRGWVKRGRFVDAK
GLYCRLFQDSELLESLNGNTALPETWNVVSRQTMNALADGNLSYEDATPFLYLKELSQGF
HTNTVIRHVFVDEVQDYSPFQLEFMRRMFPRAKMTVLGDLNQAIYAQGEALGELAGLVSI
YGEENTEVVSLTQSYRSTYEIVEFTRSMIPGGDRIIPFNRRGEEPLLREVSGREELISRV
EEDILDLHSRGYHYVAVICKTAEESSRIHEGLKDKLPIQLVTKDTPNFQKGTLVLPAYLA
KGVEFDAVIICDGSEESYGRESERKLFYTACTRAMHILHIFYLGKPSRFIPVKALKTGTH
AQ
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
gtgtccataaacgaaaccgaatggaaagaagaacagaatcgggtagaccgcgttaccgga
cttctgaagcgtcatatccgggccctctctgaggagctgggactgcaccgcagcgatgtg
gttgagcttcgcaaggatttctgggaagaggtaaccgttaacttcagcagccccgacgat
cttggagaaacctcaacaagtctgcggcagcaggctcaagtcttgtcggagcgcgaacgc
catcatctgcaatccagcaaagcgctgaaaaaatataaaaagcttgtcgtatccccttac
ttcggacgcatcgattttgccgaatcgccggaaggggagacggaacgcatttatctgggc
attggctcccttatggaagacgacggcacttttctgatctatgactggcgggcgccaata
tcaagtctctattatgacggcgcaccgggagcggcatcattcgagaccccggcagggacc
gtaagcggagaaatgagcctgaagcgccagttcgtcatccaggacggaaagattgaggtg
atgttcgataccggcgtgacgatcggagacgagctgcttcagcaggtgctaagccacagc
gcagacgaccggatgaaaaatattgtggccaccattcagaaagaacagaacgccattatc
cgcaacgaccgcagccgaatgcttgttgtccagggggcggccgggagcggcaagacatcg
gcagcgctccagcgggtcgcctatctgctgtacaaataccgcggcacccttcaggctgat
caagtccttctattctcgcctaatccgctgttcaacagctatgtgtccaccgttcttccc
gaactgggcgaggacaatatgcagcagacgaccttccagatgtatctagagcacagactg
ggccaagaatttcagctggaggatgtattcacccagacggaaacgctgctgaacagcccg
gaaggccccgagacggacgcccggagggacggaatcgcctataagtcctcggtagcgttt
cttgatgtcatccgcggctatgcgtttaggctggagcatgaagggatgctcttcaagccg
ctcatgttccagggccaggctatcgtgggcaaagaagagatggagagaaagttctacagc
tacgacccatctatcaggctggcgaaccggatcgaccttatgaccggctggctgctgaag
aagattgccctctttagcaccgaggagcggagtgcggcttgggtggaggatcagatcgag
ctgctggactccggggagtaccaccgcgcttatcagatgatgaggcgcaagcagcggggc
aaggaggagacgttcgacgatttttacatggaaaaggaactgctcgcccgctatgtggtc
agccagcggctcaaaccgctgcggggttgggtcaagcgcggccgttttgtcgacgccaaa
gggctttattgccggttgtttcaggacagtgagctgctcgaaagcctgaacggcaacacc
gcacttccggagacctggaatgttgtgagcaggcagacgatgaatgcgctggctgacggc
aatctctcgtacgaggacgcgacaccgttcttatatctaaaggagctcagccaaggattc
cataccaataccgtcatacgccatgtgttcgtggatgaggtgcaggattattcgccgttc
cagctggaatttatgcggcgcatgttcccaagggcaaaaatgactgtgcttggcgatctt
aatcaggcgatttatgcccagggagaggcgctcggcgagctggcgggactggtaagcatt
tacggggaagaaaatacggaagttgtctccctgacgcaaagctaccgttccacctatgaa
atcgttgagtttacccgttcgatgattcctggcggcgaccggattattccattcaaccgc
agaggggaagaaccattattaagggaagtttcaggccgggaagagctcatctcccgggtg
gaagaggatattctggatctgcactcgagaggctatcattacgttgcggtaatctgcaag
acggctgaggaaagctcccggatacatgagggtcttaaggataaactgccgatacagctt
gtcaccaaagatacgccgaatttccagaaagggacgctggttctgcctgcttatctggca
aaaggggtcgagttcgacgcggtgatcatctgcgacggctccgaagaaagctatggcaga
gagagcgagcggaagctgttctacacggcctgtacacgggcgatgcacatcctgcatatt
ttttatctcggcaaaccgagccggttcatacccgtcaaagcgctgaagaccggaactcat
gcccaataa
DBGET
integrated database retrieval system
