Paenibacillus durus: PDUR_16120
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Entry
PDUR_16120 CDS
T03297
Name
(GenBank) dimethylallyladenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pdu
Paenibacillus durus
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdu03016
]
PDUR_16120
Enzymes [BR:
pdu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
PDUR_16120
Transfer RNA biogenesis [BR:
pdu03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PDUR_16120
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AIQ13263
UniProt:
A0A089HSB0
LinkDB
All DBs
Position
complement(3660246..3661829)
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AA seq
527 aa
AA seq
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MTKENSSPDLKSGKGGKDYSKYFDFSGAKVISEEEGKTTYRIKGRTIQVNSQPDYKEGKR
RGKEEIEVHYDFAIPEDMRAFGEGKLYSITTYGCQMNEHDTETMKGLLEQMGYRSTEDRN
QADIILLNTCAIRENAEDKVFGELGHLKHLKTEKPGLLLGVCGCMSQEEGVVSRIMAKHG
FVDMIFGTHNIHRLPALIKEAMFSKELVVEVWSKEGDIIENLPKKREGMRAWVNIMYGCD
KFCTYCIVPYTRGKERSRRPEDVIAELRDLARQGFKEVTLLGQNVNAYGKDFNDIDYTFG
DLMDDLRKIDIPRIRFMTSHPRDFDDKLVEVLGKGGNLMESIHLPVQSGSNAILKRMSRK
YSRETFLKLVGKLKASVKDLVLTTDIIVGFPGETEEQFEETLSLVREVGFDMAYTFIYSP
REGTPAASMEDNVPAEVKSDRLRRLNELISEQSRIGNDRMLGQTVEVLVEGESKNNASVL
SGRTRSNKLVHFEGPKELIGSFIKVRITDTKTWYIKGDYVAEAAAVH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggagaacagctcaccggacttaaaatccggcaagggtggcaaggattactcc
aaatacttcgattttagcggagctaaagtaatcagcgaagaagaaggcaagaccacatac
cgcatcaagggaagaacgattcaggtgaatagccagcccgactataaggaaggtaaacgg
cggggtaaggaagaaatagaggtccattacgattttgccattcccgaggatatgagagct
tttggcgaaggcaaattgtattccatcacgacctacggctgccaaatgaacgagcatgac
accgagacaatgaaaggcctgctggagcaaatgggctaccggagcaccgaggaccggaat
caggcggatatcattcttctcaatacttgcgccattcgggagaacgccgaggataaggta
ttcggggagctcggccacctcaagcatctgaagacggaaaaaccgggcctcttgctcggc
gtctgcggatgcatgtcccaggaagagggagtcgtaagccggatcatggcgaagcacggc
tttgtcgatatgattttcggaacgcataatatccaccgcctccctgcattgattaaggaa
gcgatgttcagcaaggaactggtcgtggaggtctggtccaaggaaggcgacattatcgag
aacctgccgaaaaaaagggagggtatgcgcgcctgggtcaacatcatgtacggctgcgac
aaattctgtacctactgcatcgtcccgtacacccggggcaaggaacgaagccgccgtccc
gaggacgtgattgcggagcttcgcgatctggcccgccagggcttcaaggaagtgacgctg
ctcgggcagaacgtgaacgcttacggcaaggattttaatgatatcgattatacgtttggc
gatttgatggacgacctgcgcaagattgatattccgcgtatccggttcatgacgtcccac
ccgcgtgattttgacgataagcttgtggaagtgctgggcaagggcggcaatctgatggag
agcatccatctgcccgttcagtccggcagcaatgccattctgaagagaatgagccgcaaa
tacagccgggagactttcctgaaactcgtcggcaagcttaaggcatcggtcaaggatctt
gtgctgaccacagatattatcgtcggcttccccggcgagacggaggagcagttcgaggaa
acgctgtcgctcgtgcgcgaggttggcttcgacatggcctacacgttcatttattctcct
cgtgaaggaactccggcggcctctatggaggacaatgtgcctgcagaggtcaagagcgac
cggctgcggcggttgaacgagctgattagcgagcagagccggattggcaatgatcggatg
cttggacagacggttgaggtgctggttgaaggagagagtaaaaataacgcctccgtgctg
tccggaagaacccgcagcaacaagctggttcattttgaaggaccgaaggagcttatcggc
agctttatcaaggtgcggatcaccgatacgaagacctggtatatcaaaggcgattacgtg
gccgaagccgccgccgtccattaa
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