Paenibacillus durus: PDUR_16310
Help
Entry
PDUR_16310 CDS
T03297
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pdu
Paenibacillus durus
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdu03016
]
PDUR_16310
Enzymes [BR:
pdu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PDUR_16310
Transfer RNA biogenesis [BR:
pdu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PDUR_16310
Prokaryotic type
PDUR_16310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIQ13298
UniProt:
A0A089HSF3
LinkDB
All DBs
Position
complement(3700968..3701882)
Genome browser
AA seq
304 aa
AA seq
DB search
MSELEGVLAVYKPAGFTSHDVVAKTRRILGMKRIGHAGTLDPQVTGVLPLCLGRATRVVE
YIQELPKEYIATLRLGMSSDTEDLTGTVTETADDIRVTEDEVRRTLDSFRGIISQTPPMY
SAVKVGGKRLYELAREGKTVERKSREVEIYEIEMLEMVWNGRFPDITFRVLCSKGTYIRT
LCVDIGQALSLPGVMVKLERTMSAGIRADRCLTLEEIGERMANGSLQEFLIPADEAIHHL
PAHKVADEKKAAALQGQRLAARFVAPEVLVDGPIRLYDLQGSFLGIYKREETGSIAPVKV
FAQG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcttgaaggcgttctggctgtgtacaagccggccggctttacctcgcatgac
gttgtagccaagacgcggcgtatactcgggatgaaaagaattgggcacgccggcacgctg
gaccctcaggttaccggcgttctgccgctttgcctcggacgggccacgcgcgtcgtggag
tacattcaagagcttcctaaggaatatatcgccacactgcggcttggcatgtccagcgac
acggaagacctgaccggcaccgtgacggaaacggcggatgacataagggtaactgaagat
gaggtaagacgtacgctggattcgttccggggaattatttctcagacgcctcccatgtat
tctgccgttaaggtgggcggcaaacgtctttatgagctggcccgtgagggcaagactgtg
gagcgcaaaagccgtgaggttgaaatttacgagatcgagatgttggagatggtctggaac
gggagattcccggacatcaccttccgcgtcttgtgttccaaaggcacgtatatccgcacg
ctctgcgtcgatatcggccaggcgctgtcgctgcctggtgtgatggttaagctggagcgc
acgatgtcggcgggaatccgggctgatcgctgccttacacttgaggaaatcggtgagcgc
atggcgaatggaagtcttcaggagtttcttatccctgccgatgaggcgattcatcatctg
ccggcccataaggtggcggacgagaagaaagcagccgccctacagggccagcggctggcc
gcccggtttgtggcgcctgaagttctagtggacggccccattcgtctttacgatcttcaa
ggcagttttcttggcatttacaaacgcgaggagaccggttcgatcgctcctgtgaaagta
tttgctcaaggttga
DBGET
integrated database retrieval system
