Paenibacillus durus: PDUR_16445
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Entry
PDUR_16445 CDS
T03297
Name
(GenBank) RNA polymerase sigma factor SigD
KO
K02405
RNA polymerase sigma factor FliA
Organism
pdu
Paenibacillus durus
Pathway
pdu02020
Two-component system
pdu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PDUR_16445
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PDUR_16445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdu03021
]
PDUR_16445
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pdu02035
]
PDUR_16445
Transcription machinery [BR:
pdu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PDUR_16445
Bacterial motility proteins [BR:
pdu02035
]
Flagellar system
Flagellar assembly proteins
Stator
PDUR_16445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_38
PhyR_sigma-like
HTH_23
Sigma70_ECF
CtpB_N-like
7TMR-HDED
Motif
Other DBs
NCBI-ProteinID:
AIQ13325
UniProt:
A0A089HRH3
LinkDB
All DBs
Position
complement(3732038..3732826)
Genome browser
AA seq
262 aa
AA seq
DB search
MNEHKASHLEHQALWEQWKEEGNPEAKKNLIEKYLPIVDYVAGRLAVGLPKNVSKDDLAS
NGVMGLIDAIEKFDYKRGLQFQTYASWRVRGAILDSLRQGDWVPRSVREKAKKIEDAYQQ
LEQKYLRSVSDEEMSRYLDVTEQEFQSMLQDVAVMTLCSLEDPIREEESETRMSVLVDDK
AKNPDHKVNEFYLRETLTKGIEKLTVKERTVVSLLYYEDLSLSEIAEVMSLSPSRISQLH
SKAILRLRGTLEKNRDLLMQND
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgagcataaagcttctcatttggaacaccaggccctctgggaacagtggaaagaa
gaagggaacccggaagccaaaaaaaatctgatcgagaaatatctgcccatagtggattat
gttgccgggcgtttggccgtaggtctgcctaaaaacgtctcgaaagacgacctggcaagc
aatggcgttatgggactgattgacgcgattgaaaagtttgattacaaaaggggactgcaa
tttcaaacttatgcctcctggcgtgtccgaggcgcaattctcgattctctacgtcaaggc
gactgggttccgcgctcggtccgggaaaaggcgaaaaagattgaggatgcataccagcag
ctcgaacagaaatatttaagatctgtcagcgatgaagagatgagccgctatttagatgta
accgaacaagagtttcaaagcatgctccaggatgtggcggtgatgacgctctgttcttta
gaggatccaattcgggaagaagaatcagagacccgtatgtcggtattggtggatgataaa
gccaagaaccctgatcataaagtaaatgagttctatcttcgtgaaacgcttaccaaaggc
atcgagaaactaactgtgaaagaacggaccgtcgtgtcccttttatattatgaagaccta
tctttgagcgaaattgcagaggtcatgtccttatctccttcacggatatcgcagctgcat
tccaaggcgatactgcggctgcggggaacgcttgagaagaatcgggatctcttaatgcaa
aatgattag
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