Paenibacillus durus: PDUR_19825
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Entry
PDUR_19825 CDS
T03297
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pdu
Paenibacillus durus
Pathway
pdu00470
D-Amino acid metabolism
pdu00550
Peptidoglycan biosynthesis
pdu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PDUR_19825 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PDUR_19825 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pdu01011
]
PDUR_19825 (murD)
Enzymes [BR:
pdu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PDUR_19825 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pdu01011
]
Precursor biosynthesis
Amino acid ligase
PDUR_19825 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Pyr_redox_3
TrkA_N
Phage-A118_gp45
Motif
Other DBs
NCBI-ProteinID:
AIQ13903
UniProt:
A0A089HUA8
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Position
complement(4374657..4376078)
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AA seq
473 aa
AA seq
DB search
MKHPDMYRDEEIVVLGLAKSGVQVAKVLHEHGAVVTVNDKKEREQCPEASELESLGISVI
CGGHPDGLVHEGVKLVVKNPGIPYSVPPVQKALELGIEVVTEVEVAYHLCEAPIIGITGS
NGKTTTTTWVGKMLEAAGMNPIVAGNIGTPLTQAAQEASPDNWMVVELSSFQLKGTEDFR
PKVGCLLNVAETHLDYHGDMRDYVDSKAKLFANQGVSDTAVLNWDDPYCRGLVPGIKAGI
LPFSMSEELVQGVFVRPSYVPDTEDDLKRVIIYRDYTESETVIAEVASIGLPGRFNVENA
LAACAVAIAAGADPAGLAETLASFRGVEHRLEYVAEKGGAAYYNNSKATNAKATSMALAS
FRQPIVLIAGGLDRGSDYLELVPVLQGRVKALVALGQTKDKLAHVAKLAGLKTVITVDNG
DSAASVLQKAVQEAAALAEEGDIVLLSPACASWDMFTSYEVRGRIFKEAVHNL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaaacatccggatatgtaccgcgatgaagaaatcgtcgttctggggcttgcgaagagc
ggcgtgcaggtggccaaggtgctgcatgagcatggcgccgtcgtcacggttaacgacaaa
aaagagagagaacaatgtcccgaagcttccgaactggaatctttgggaatttctgttata
tgtggaggtcatccggacggacttgtccacgaaggcgtaaagcttgtcgttaaaaatccc
ggaatcccgtacagcgttccgccggttcagaaagcgctggagctgggcatcgaggtggtg
acggaggtggaggtggcctatcacctgtgcgaggcgccgatcatcggtattacgggctcc
aacggcaagacgaccacaacgacctgggtaggaaaaatgctggaggccgccggtatgaat
ccgatcgtagccggaaatatcggtactccgctcactcaggcggcgcaggaagcctctccg
gacaattggatggttgtggagctgagcagctttcagcttaaagggacggaagacttccgg
cctaaagtgggctgtctgctgaatgtggccgagacccatcttgactaccacggcgatatg
cgtgactacgtggattccaaagcgaagctttttgccaatcagggagtgagtgatacggct
gtgcttaactgggacgatccgtattgcagagggcttgtgcctggtatcaaggcgggtatt
ctgccgttttctatgagtgaagaactggtgcaaggagtatttgtccgcccctcttacgtg
cctgacaccgaggatgacctgaaacgcgtcattatctaccgcgactatacagagagtgaa
accgtaatcgcggaggtggcttccatcggtcttcccggacgctttaatgtggagaacgcg
ctggcggcctgcgctgtcgccattgccgccggagcggaccctgccggactcgccgaaact
ctggcttctttccgcggtgtggagcaccggctggaatatgtcgcggaaaagggcggcgcg
gcttactacaacaactccaaagcgacaaacgccaaggcaacgtcgatggcgcttgcctcg
ttccgccagccgatcgtgctgattgccggcgggcttgaccgaggatcggattacttggaa
ctggtcccggtccttcaaggacgagtcaaagcgctggtggcgcttggacagacgaaggac
aagctcgcgcatgttgcgaagctcgccggattaaagacggttatcactgtcgataatgga
gacagcgccgcctcggtgctgcagaaggccgtgcaggaagcagcggctctcgccgaagaa
ggtgatatcgttctgctgtcgcccgcctgcgccagttgggacatgttcacatcctatgaa
gtgcgggggcgtatttttaaagaggcggtgcataacctgtaa
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