Paenibacillus durus: PDUR_20160
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Entry
PDUR_20160 CDS
T03297
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pdu
Paenibacillus durus
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdu03400
]
PDUR_20160
DNA repair and recombination proteins [BR:
pdu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PDUR_20160
Archaeal homologous recombinant proteins
PDUR_20160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
baeRF_family2
DUF2379
Motif
Other DBs
NCBI-ProteinID:
AIQ13968
UniProt:
A0A089HUF4
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All DBs
Position
complement(4447238..4448419)
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AA seq
393 aa
AA seq
DB search
MRILHTGDWHLGRTLEGRSRQKEQEAFVDELVAIADEERADLIMLAGDVYDSVNPPAAAE
QLFYEAASRLASGGRQLVVIAGNHDQPERVSSVSPLVFGHGITLVGLPAADPVTVQIART
GETARIAALPYPSEARLGELLAEDSDEAGLRLAYSARVGRLMKLLSREFTPDTVNLAMSH
IYVLGGVESDSERPIQVGGAYTVDPSALACGAQYTALGHLHRPQKVKGEGVIRYSGSPLA
YSFSEAGQAKSVTLLELSPGAEAKPEEILLRCGRPLVEWDCAGGLDEVYRWLDEGRDANA
FIDLRIRLSEALSMGDIQRLRKAREGIVHIRPVYPEMERELEATLRSRMPVHELFRRFYQ
RQTGGAEPEDSLVELFLELAEEERDGQEAEETQ
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcggattttgcatacgggcgactggcatttgggccgtacgctggaaggaagaagcagg
cagaaggagcaggaggcgttcgttgacgaactggtcgccattgccgatgaggagcgtgct
gaccttattatgctggcgggcgacgtctatgactccgtcaatcctccggctgcggctgag
cagttattctatgaagcggcttcaagacttgcatccgggggaaggcaattggtcgttatc
gcaggcaaccatgatcagcctgagcgcgtatcctccgtatccccgcttgtcttcggacac
ggcattacccttgtcggtctgcccgcagccgatccggtgacggtccagatcgcccggacc
ggggaaaccgcgcgtatagcggcacttccgtacccttccgaagcccgtcttggcgagctg
ctggccgaagacagcgacgaagctggtctgcggctcgcttacagcgcgcgcgtaggccga
ctgatgaagctattgtcccgggaattcacgccagacacggtcaatttggcgatgagccat
atttatgtgctgggcggcgtggagagcgactctgagcgcccgattcaggtcggcggggcg
tataccgtggatccttcggcgctggcatgcggcgcgcagtatacagcgctcggccatctt
caccgtccgcagaaggtcaagggagaaggggttatccgatacagcggttctccgctggcg
tacagcttctcggaggcgggccaggccaagtccgtgacgcttctggaactctcgccggga
gcggaggcgaagccggaagaaattctgctgcgctgcggccgtcctctggtagagtgggac
tgcgcggggggattggatgaagtgtaccggtggcttgacgagggcagggacgccaatgcg
tttattgatctgagaatccgcttaagcgaggcgttgtcgatgggagatatccagcggctt
cgcaaagctcgggaaggtattgtacatatccgtccggtctatccggagatggaacgtgaa
ctggaagcgacccttcgctcccgcatgccggtgcatgagctgttcagaaggttctaccag
cggcagaccggtggagctgagccggaagacagccttgtggagttgtttctggagctggcg
gaggaagaacgtgacggacaggaagcggaggagacccaatga
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