Paenibacillus durus: PDUR_20190
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Entry
PDUR_20190 CDS
T03297
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
pdu
Paenibacillus durus
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdu03016
]
PDUR_20190
Enzymes [BR:
pdu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
PDUR_20190
Transfer RNA biogenesis [BR:
pdu03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PDUR_20190
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AIQ13974
UniProt:
A0A089IYG2
LinkDB
All DBs
Position
complement(4461636..4462973)
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AA seq
445 aa
AA seq
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MPSVAFYTLGCKVNFYDTEGIWQLFKQEGYEQVDFEGQADVYLINTCTVTNTGDKKSRQM
IRRAVRRNPDAIVAVTGCYAQTSPGEILDIPGVDLVIGNQDRDQIIRHVNSIRESRQPVN
AVRNIMKTREFEELDVPGFAERTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDPKAIVKQ
AHQLVGAGYKEIVLTGIHTGGYGDDLDNYRLANLLWELDKVDGLERVRISSIEASQIDDK
LLDVLNRSSKMCRHLHIPLQAGHNEVLKRMRRKYTTEEYFAKMQLIRQAMPDVAITTDVI
VGFPGETDEMFRAGYDFMKAVDYSEMHVFPYSKRTGTPAARMEDQVDEEIKNERVQQLID
LSEEMQLAYARRFIGRTVGVIPERSAKGAPGRDVQHGFSDNYMQVLFEGGDELQGQLCQV
KITEAGVNECRGELVGAAGEALTQL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgttgcattttatactttaggctgtaaagtcaacttttacgataccgaaggc
atctggcagctcttcaaacaggaaggctacgagcaagtggacttcgaggggcaggcggat
gtttatctgattaatacctgcacggttaccaatactggggataaaaaaagccggcaaatg
atccgccgcgccgtccggcgcaatccggatgcgattgtggccgttaccggctgctacgcg
cagacctctccgggcgagattctggacattcccggcgttgatctggtcatcggcaaccag
gaccgcgaccagatcatccgtcatgtgaacagcatccgggaatcgcggcagcccgtcaac
gccgtccggaacatcatgaagacgcgggagttcgaggaactcgacgtgccgggctttgcg
gagcggacgcgggcttttctcaagattcaggacggctgcaataacttctgcaccttctgc
atcattccgtggtcgcgtggactgtcccgcagccgcgatccgaaagccatcgtgaagcag
gcgcatcagctggtgggggccgggtacaaggaaatcgtgctgaccggcatccataccggc
ggctacggcgacgatctcgacaattaccgtctcgccaacctgctttgggagctggacaag
gtggacggcctggaacgcgtgcgcatcagctcgattgaagcgagccagatcgacgataag
ctgctggatgtgctgaaccgctcgtccaaaatgtgccgtcatctgcacatcccgctgcag
gccggacacaatgaagtgctgaaacggatgcgccggaaatatacgaccgaagagtatttt
gccaaaatgcagctgatccgccaggcgatgccggatgttgccatcaccaccgacgttatc
gtcggcttcccgggagagacggacgagatgttccgggcagggtatgattttatgaaggcg
gtcgattattcggaaatgcatgtgttcccttattcgaaacgtacgggtacgccagcggcc
cgtatggaggatcaggtggatgaggagattaagaacgaacgtgtgcagcagctgatcgac
ttgtccgaggaaatgcagctggcgtatgcccgcagattcatcggacgcacggtcggcgtc
attccggagagatcggcgaaaggcgcgcccggacgggatgtccagcacggcttcagcgac
aactacatgcaggtgctgtttgaaggtggcgatgagctgcagggccagctctgccaggtg
aagataaccgaagccggtgtgaatgagtgcaggggcgaactggtcggcgcagccggggaa
gccctaacgcagctttag
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