Paenibacillus durus: PDUR_20470
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Entry
PDUR_20470 CDS
T03297
Name
(GenBank) CMP deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
pdu
Paenibacillus durus
Pathway
pdu00240
Pyrimidine metabolism
pdu01100
Metabolic pathways
pdu01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PDUR_20470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pdu02044
]
PDUR_20470
Enzymes [BR:
pdu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
PDUR_20470
Secretion system [BR:
pdu02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
PDUR_20470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
XOO_2897-deam
APOBEC_N
SNAD4
DUF5796
OTT_1508_deam
Motif
Other DBs
NCBI-ProteinID:
AIQ14026
UniProt:
A0A089HPV1
LinkDB
All DBs
Position
complement(4525306..4525824)
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AA seq
172 aa
AA seq
DB search
MTIAYRKDWDTYFMDIAFMVSTRSRCPRRHVGAVLVQGKKLLGTAYNGAPMGVPDCSEAG
CMISEQYELEVVDGVETMVKKQRCIRTIHAEQNLLLFTDRIDREGSTVYVTDEPCWTCAN
MLANSGVVEIVYHRSYPKDTEKVRSMMASKGIQFRRLEGYEPPRETVLDVQG
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgaccattgcctatcgcaaagattgggatacgtattttatggacatcgcctttatggtc
tcgacccgttcgcgctgtccgcgccgtcacgtcggcgctgtgcttgttcagggcaagaag
ctgctcggcacggcctataacggcgctccaatgggggtgccggactgctccgaagcgggc
tgcatgatctctgagcagtatgagttggaggttgtggacggggtggagacgatggtcaag
aagcagcgctgcatccggacgattcatgcggagcagaatctgctgctctttacggaccgg
atcgacagggaaggcagcacggtgtacgtaaccgacgagccctgctggacctgcgcgaat
atgctggccaacagcggagtcgtcgaaatcgtctaccaccggagctatccgaaggacacg
gaaaaggtccggtcaatgatggcctccaaaggcatccagtttcgccggttggaaggatat
gaacctcctcgtgagacggttctggatgtgcagggttaa
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