Paenibacillus durus: PDUR_21915
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Entry
PDUR_21915 CDS
T03297
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
pdu
Paenibacillus durus
Pathway
pdu00020
Citrate cycle (TCA cycle)
pdu00190
Oxidative phosphorylation
pdu00650
Butanoate metabolism
pdu00720
Other carbon fixation pathways
pdu01100
Metabolic pathways
pdu01110
Biosynthesis of secondary metabolites
pdu01120
Microbial metabolism in diverse environments
pdu01200
Carbon metabolism
Module
pdu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pdu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pdu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PDUR_21915 (sdhB)
00650 Butanoate metabolism
PDUR_21915 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
PDUR_21915 (sdhB)
00720 Other carbon fixation pathways
PDUR_21915 (sdhB)
Enzymes [BR:
pdu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PDUR_21915 (sdhB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_10
Fer4_17
Fer4_2
Fer4
Fer4_16
Fer4_21
Fer4_4
Fer4_13
Fer4_18
Fer4_3
Fer4_15
Fer4_6
Motif
Other DBs
NCBI-ProteinID:
AIQ14263
UniProt:
A0A089HV68
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Position
complement(4836694..4837458)
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AA seq
254 aa
AA seq
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MAETAAATKNVKFIITRQDDPQSAPYTEEFNLPYRPGMNVISALMEIQRNPVNAKGDTTV
PVCWESNCLEEVCGACSMVINGKPRQACAALIDNLEQPIRVEPMSTFPVVRDLVIDRTRM
FNALKKVKAWIPIDGTYDLGPGPRMAEKKRQWAYELSKCMTCGVCLEACPNVNAKTDFIG
PAAISQVRLFNAHPTGEMNADERLEALMTDGGIEGCGNSQNCVRACPKGIPLTTSIAEIN
KQTTKHMFKRWLGV
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacagcggcagctaccaaaaacgtgaaatttatcatcacccgccaggacgat
ccgcagagcgcgccctacacggaggaattcaatcttccctaccgtccggggatgaacgtc
atcagcgccctgatggaaattcagcgcaatccggtcaacgccaagggcgacaccacagtt
cccgtctgctgggaatcgaactgcctggaggaggtatgcggcgcctgctccatggtcatc
aacggcaaaccgcgccaggcctgcgcagccctgatcgacaatctggagcagccgatccgc
gtcgagccgatgagtaccttcccggttgttcgcgacctcgtcatcgaccgtacccggatg
tttaacgcgcttaaaaaggtaaaagcctggattccgatcgacggaacgtacgacctcggt
ccgggtccgcgcatggccgagaaaaagcggcagtgggcctacgaactgtccaaatgcatg
acctgcggcgtctgcctggaggcctgcccgaatgttaacgcgaagaccgactttattggt
ccggcggctatttcgcaggtccgcctgttcaacgcccatccgacgggtgagatgaacgcc
gacgaacggctggaggcgctgatgacggatggcggcatcgaaggctgcggcaactcgcag
aactgtgtccgggcctgcccgaaaggcatcccgcttacgacctccatcgccgaaatcaac
aagcagacgacgaagcatatgttcaagcggtggctgggcgtgtaa
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