KEGG   Prunus dulcis (almond): 117612152
Entry
117612152         CDS       T07328                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI2
  KO
K10752  histone-binding protein RBBP4
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03082  ATP-dependent chromatin remodeling
pdul03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    117612152
   03083 Polycomb repressive complex
    117612152
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pdul03036]
    117612152
Chromosome and associated proteins [BR:pdul03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     117612152
  Histone modification proteins
   HAT complexes
    HATB complex
     117612152
   HDAC complexes
    Sin3A-HDAC complex
     117612152
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     117612152
    PRC2.2
     117612152
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     117612152
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    117612152
  Chromatin remodeling factors
   NuRD complex
    117612152
   NuRF complex
    117612152
   NuRF complex (fruit fly)
    117612152
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd WDR55 EIF3I WD_LRWD1 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st WD40_RFWD3 MIOS_WD40 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_1st Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 DUF6922
Other DBs
NCBI-GeneID: 117612152
NCBI-ProteinID: XP_034196791
LinkDB
Position
8:complement(14843723..14846709)
AA seq 403 aa
MAEDQDQDAALLEEEYAVWKKNTPFLYDLIISHPLEWPSLTVHWAPSAPQPHAETSFAVH
KLVLGTHTSDGYPNFLMVADALLPTSQPNFGAISEEDPEMPKVEITQKIPVDGEVNRARW
MPQKPTIVGAKTSGAEVYVFDSAKHGLKPQEGGCDPDVRLKGHDKEGYGLSWSPFKEGYL
LSGSYDCKICLWDVSASPQEKVLDPIHVYERHESVVGDVSWHPKNENLFGSVGDDCQLMI
WDLRTNQTQHSVKAHEKEVNYLSFNPYNEWILATASSDTTIGLLDMRKLSVPLHVLSSHT
EEVFQVEWDPNHETVLASYADDRRLMVWDLNRIGDEQLEGDGDDGPPELLFSHGGHKAKI
SDFSWNKYEPWVISSVAEDNTLQVWQIADSIYGDDYDVQASDV
NT seq 1212 nt   +upstreamnt  +downstreamnt
atggcggaggaccaggaccaagatgcggctctccttgaggaagagtacgccgtgtggaag
aagaacacccctttcctctacgacctcatcatctctcaccctctcgaatggccatctctc
accgtccattgggcgccatcggccccacagccccacgccgaaacatctttcgccgtacac
aagctcgtcctgggtacccacacctccgatggctaccccaacttcctcatggtcgccgac
gccctcctccccacatcccaacccaactttggcgccatttctgaagaagatcctgagatg
cctaaggtggaaataacgcagaagattcctgttgatggggaagtgaatagggcacggtgg
atgccacagaaaccaactattgtgggtgcgaagaccagcggtgctgaggtgtatgtgttt
gattctgcgaaacatgggttgaagcctcaagagggtggttgtgatcctgatgtgaggtta
aagggtcatgataaagaaggatatggcttgtcctggagcccttttaaggagggttacctt
ttgagtggttcttatgattgtaaaatttgtttatgggatgtgtctgcttcgcctcaagag
aaagtgcttgatccaatccatgtttatgagcgtcatgaaagtgtggttggagatgtatca
tggcatccgaagaacgagaacctatttgggtctgttggggatgactgtcagttgatgatt
tgggacttacgcacaaaccaaacgcagcattctgtcaaagctcatgagaaagaggtgaac
tatctttctttcaatccgtataatgaatggattctggcgacagcatcttcagatactacc
attggtctgttagatatgcggaaactgtctgtgccattgcatgttctgagtagccacaca
gaggaggtgttccaggttgaatgggatccgaatcatgaaactgtgttggcatcttacgct
gatgaccgaaggttgatggtttgggacctcaacaggattggggatgagcagttggaggga
gatggtgatgatggcccgccagaacttctcttctcacatggcggccataaagcaaagata
tcagatttctcttggaacaaatatgagccatgggtcatttcaagtgtagctgaagacaac
actcttcaagtttggcaaattgctgacagcatatatggggacgattatgatgtgcaagct
tccgatgtttaa

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