Prunus dulcis (almond): 117612247
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Entry
117612247 CDS
T07328
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117612247
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdul04040
]
117612247
Ion channels [BR:
pdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117612247
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Motif
Pfam:
Ion_trans
cNMP_binding
SoPB_HTH
Motif
Other DBs
NCBI-GeneID:
117612247
NCBI-ProteinID:
XP_034196903
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Position
8:10561547..10565603
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AA seq
549 aa
AA seq
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MSLRSTMDLFYAVNIFIQIYIEPKVPTFRVMGRSYLHTIVLTKGTILVEDALAMANRIWR
ISSHILIDILSVLPIPQAVILIFMHSSSLNTRKFLAFLALLQYVPRVLRIYLLCTKLNQP
PARGTEIWILFQGAFSFFLYILASHVFGAFWYFLAIQREKACWQNACRNNNGCQATTFYC
NGRSIRNITFLDDLCSMNPHNTNATPFDFGMFVEAVQSGVLESTNLPNKFFHCFWWGLRN
LSSLGQNLETSNYTWENIFAIFISLSGLLLVLLYLPTNLKICMELVTRTSAKMRPLKRKD
LEVQLWLSENDIPKDMKAPIMQKVHKLEQNTDVHVENILSILPLEEKRFIKRHLCWPTMN
KVPMLRDMDDQVLKEIFDNLKPVSYTEDKCIIGEGEPLVKMLIITRGILLTYTTNNGARR
SSGGSSTTTKRLAKGDFCGEELLTWASTFSPLSDLPISTTFVKSLTKVEAFALMANDLKI
IASKFWRHFSMDARMPVHLAANLIQTNWRRRNTRGAIPNPLSSSEEFRLMTIMTHPVHLK
KGEKEEEEG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcactacgatcgacaatggatctattttatgcagtgaatatttttattcaaatttat
atcgaacctaaagttccaacatttagggtcatggggagatcatatctccataccatagtt
ttgacaaaaggaaccatattagttgaagatgctttggcaatggctaacaggatttggagg
atctcatcacacatcttaattgacattttatcggttcttcccattccacaggcagtgatc
cttatcttcatgcactctagttctttgaatacgaggaagtttttggcttttctggctctg
ttacagtatgtaccacgagttcttcgtatctacttattgtgtaccaaactcaaccagcct
cctgctagagggactgagatatggattttatttcaaggcgcttttagtttctttttgtac
atccttgctagtcatgtatttggagctttctggtactttttagctatccagcgagagaag
gcttgctggcaaaatgcttgtcgaaacaacaatggatgtcaagctactaccttctactgc
aatggtcgttcaatcagaaacatcacatttctggacgacttatgctctatgaatccacac
aatactaatgcaacacccttcgattttggtatgtttgttgaggctgtccagtctggtgtg
ttggagtcaacaaatttaccgaataaattctttcattgtttctggtggggcttgcgaaat
ctaagttctctcgggcaaaacctcgagacgagtaactatacatgggaaaatatctttgcc
atttttatttctctaagtggcttgctcctggttctactatacctccctacaaatttgaag
atatgtatggagttggtaactagaacatcagccaagatgcggccgctgaaaaggaaagat
ctagaggtacaactctggttatctgaaaatgacatccctaaggatatgaaggcgcccatc
atgcaaaaggtgcacaaacttgaacaaaacacagatgttcatgtggagaatatcctctct
attcttcccttggaagaaaagagatttattaagcgacatctctgctggcctacaatgaac
aaagttccaatgcttcgagatatggacgatcaagtgttgaaagaaatctttgacaatctc
aagccagtgagctatacagaagacaaatgtataattggagagggtgaaccacttgttaaa
atgctcatcatcactcgaggcattttgttgacctacacaactaacaatggtgctagaaga
agtagtggaggttcttcaaccaccaccaagcgtcttgccaaaggtgatttctgtggagaa
gaacttctaacctgggcatcaacattctccccgctttcagacttacccatctccacaaca
tttgtcaagtccctcacaaaagttgaagcatttgcgctcatggccaatgacttgaagatt
atagcgtctaaattctggaggcattttagcatggatgctcggatgccggtacatcttgct
gcaaatcttatacaaaccaactggcgccgccgcaatacaaggggtgctataccgaatcct
ctaagctccagcgaggagttccggttgatgactattatgactcatccggtccacttgaag
aaaggggagaaggaggaggaagaagggtag
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