Prunus dulcis (almond): 117613314
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Entry
117613314 CDS
T07328
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03013
Nucleocytoplasmic transport
pdul03015
mRNA surveillance pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117613314
09122 Translation
03013 Nucleocytoplasmic transport
117613314
03015 mRNA surveillance pathway
117613314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117613314
03041 Spliceosome [BR:
pdul03041
]
117613314
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
117613314
Spliceosome [BR:
pdul03041
]
Common components
Common spliceosomal components
Cap binding complex
117613314
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
117613314
NCBI-ProteinID:
XP_034197823
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MMRLIFLQLLMLPQPPFRPTYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECR
TRLILWFSHHLSNFQFIWPWEEWAYVLDLPKWAPQRVFVQEVLEREVRLSYWDKVKQSIE
NAPGLAELLPPKGAPNFKFSVEETSEGNGQHALSVDLRTMVKARASAREMIVWIEESVFP
VHGMEGTLNVVVQTLLDIGSKSFTHLITVLERYGQVIAKLCGDQDKQVMLITEIDSYWRN
NSQMSAVAIDRMMGYRLLSNLAIVRWVFSPANIEQFHLSDRPWEILRNTVSKTYNRVCDL
RKEILSLKKSIVSAEEAAATAKAELVAAESKLSLMDGEPVLGENPVRLKRLKSYAEKAKE
EELSVRESLEAKEALLARALDEFEALFLSLYKNFLNVLTERLPSASTCVTLQGLKSIHAD
SMAVDVEESSAMEVDDENGRPKKSQLNGGRMSSVYNVGEKEQWCLSTLGYLKAFSRQYAS
EIWPHMEKLDAEVLTEDVHPLIRKAVYCGLRRPVDGL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtttaatattcttgcagttactcatgctaccgcaacctcctttcaggccaaca
tattacacactagttattatcgacctctgtaaggctcttcctggagcctttcctgcagta
gttgctggtgctgtacgagctctattcgagaaaattgctgatttagatatggaatgtcga
acacggctcatcctttggttttcccaccacttatcaaactttcagttcatctggccatgg
gaagagtgggcttatgtcttagacctgccaaaatgggctccacaacgtgtatttgttcag
gaggttctggagagagaagttcgtttatcctactgggacaaagtgaagcagagcattgag
aatgcccctggcttagcagagttgcttcctcccaagggggcaccaaatttcaaattcagt
gttgaagaaaccagtgaaggaaatggacaacatgcactttctgttgacctcagaaccatg
gtaaaagcgagggcatctgcccgtgaaatgattgtatggatagaggaaagtgtgtttcct
gttcatgggatggaaggtaccctcaatgtggttgtgcaaactcttctcgacattggatct
aaaagtttcactcatttgattaccgtattggagagatatggtcaagtcattgcaaaacta
tgtggtgaccaggataagcaggtcatgctgataactgagattgattcttattggaggaac
aattctcaaatgagtgctgttgcaatagataggatgatgggctaccgacttttatctaat
ctggccattgtcagatgggtcttttctccagcaaacattgagcagtttcatctatcagat
cgtccatgggagattttaagaaacacagttagcaagacatataaccgtgtatgtgatcta
aggaaggagattttgtctctgaaaaagagtattgtatcagctgaagaagctgcagcaacg
gcaaaagcagagttagtggctgctgaatcaaagctttcacttatggatggtgaacctgtt
cttggggaaaatcctgtgaggctgaagcgcttgaaatcgtatgctgaaaaggcaaaggag
gaggagttgtctgtacgtgaatctttagaggctaaggaggctcttctagctcgagccctt
gatgaatttgaggcattgttcctctccttgtacaaaaacttcctgaatgtgttgacagaa
cgcctgccaagtgcatccacatgtgttacattgcagggattgaagtcaattcatgcagat
tctatggcagtcgacgttgaggaatcgtcggcaatggaggtagacgatgagaatggaaga
cctaagaaaagccaattgaatggtgggaggatgagtagtgtatataatgtaggtgaaaaa
gagcagtggtgtctatcgactttaggctacctgaaggccttctcgaggcaatatgcttct
gagatttggcctcacatggagaagttggatgcggaggttctaacggaagatgtgcatcct
cttattcggaaagcggtttattgtggccttcgtcgaccagttgatgggttgtga
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