Prunus dulcis (almond): 117614522
Help
Entry
117614522 CDS
T07328
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117614522
03036 Chromosome and associated proteins [BR:
pdul03036
]
117614522
Enzymes [BR:
pdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
117614522
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117614522
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
117614522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
UvrD-helicase
AAA_22
DEAD
PhoH
Helicase_RecD
SLFN-g3_helicase
ATPase_2
AAA_16
MOV-10_Ig-like
AAA
SNF2-rel_dom
LTD
Mg_chelatase
Cep192_D4
AAA_24
AAA_5
DAP3
Motif
Other DBs
NCBI-GeneID:
117614522
NCBI-ProteinID:
XP_034199253
LinkDB
All DBs
Position
1:complement(1234404..1239237)
Genome browser
AA seq
898 aa
AA seq
DB search
MGINGYKSDEECSVIGDKGEIGFIDFEDDKSVRSYNPYEEGPIVISVPFPYVGGKQGEKP
QSVCVGETAVDKITIKNTTHDPVELCGVKIYASSPEDSFKLSLMKPPTADSDVETIQAFL
ESTSLEDRMLQPGDTLTVWLSCKPKEIGQHKAFVHFDLETEQIERVVILLAEDKISQSMA
STKPYTRATRKKPLLVDGFHVGVRPSGVADRRPYKNRLPRYDIPKDIRELLESKQIPYVV
TEGLTRGNYADYFKTLLIMEEIQIEESMRSHDMVGVTLRKRGHQFLSLEVPGLAERRPSL
VQGDYVLAKLSEYADDTVPPYQGYIYRVEADDVYLKFPPEFHACHRDGNLYSVQFTFNRI
TMRRLYQAVDAAEKLEIMFLFPSESYQRRMIRGTRLVPISCTPNKEQMCSVEMILGCKGG
PPYVIYGPPGTGKTMTLVEAILQLYATRKNTRILVCAPSNSAADHILEKLLNAKAGTAVR
ENEIFRLNASSRPYEDVNPNHIDFCFFDDDTFKCPELRVFVRYRIIISTYMSASLLHAEG
VPRGHFSHIILDEAGQASEPETMIPISNLYHRNTVVVLAGDPKQLGPIINSSQAESFGLG
RSYLERIFECEFYSNGDKSYVTKLVRNYRCHPEILYLPNMLFYGQELIACKDDSVPFMAR
VDLLPNKDFPVLFFGIEGCDEREGSNPSWFNRTEASKVVEVTKQLTAKRNLSEEDIGIIA
PYRQQVLKLKKAFENLEMPNIKVGSVEQFQGQERQVIIISTVRSTIKHDEFDRRYCLGFL
SNPKRFNVAITRAKALLIVIGNPHIISKDPNWNRLLWRCADNSSYLGCNPPERQELVYED
PQEDLLNNEGNTWCSGDDGWARDSWQREVPHPVMEGSRQTEAPQPVVDDEAEWSDGWK
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgggtataaatggttataagtcggatgaggaatgctctgtcattggagacaaaggagaa
atcggcttcatagattttgaggatgataaatcggtgcgtagttacaacccatatgaagag
ggtccaattgttatttcagtcccattcccttatgtgggcggaaagcaaggtgaaaagcct
caatcagtatgcgtaggagaaacagctgtggataagataactattaagaacaccacccat
gacccggtggagctatgcggtgttaaaatttacgcctcaagtccagaggactctttcaag
ctttctctgatgaaacccccaactgcagactctgatgtcgaaaccatccaagccttcctt
gagtctacttctctggaggacagaatgcttcagccaggagatactttgactgtatggcta
tcttgcaaacccaaggaaattggtcagcacaaggcctttgtgcattttgatttggagact
gaacagattgaacgagttgttattctcttagcagaagataaaatatcccaatctatggcc
tcaacaaaaccatacacaagagccactagaaagaaaccacttcttgtggatggttttcat
gtgggtgtacgccctagtggagtagcagaccgacgaccgtacaagaataggcttcctcga
tacgacattccaaaagacatcagagaattacttgagagcaagcagattccttatgttgtc
accgaaggtcttacgagagggaactatgcagattacttcaaaactttactcatcatggag
gaaatacagatagaggaaagtatgaggagccatgatatggtaggtgttactttgaggaag
agaggacatcaatttttgtcccttgaagtccctgggcttgctgagagaaggccttcactt
gtccaaggggattatgttttggccaagctttctgagtatgcagatgatacagttcctccg
tatcagggttatatctaccgtgttgaggctgatgatgtttacttgaagtttcctccagaa
tttcacgcatgccacagagatggtaacctttatagtgtacaatttacatttaatcgaatc
accatgagaaggttatatcaagcagttgatgcagcagaaaaattagagataatgttcctt
tttccatctgagtcctatcagagaaggatgattagaggcactcgactggtgcctatatct
tgtacacctaataaggagcagatgtgctcagttgagatgatccttggctgcaaaggaggg
ccaccctatgtgatttatggtcctcctggaacaggcaagactatgacattagtggaagca
atcctccaactctacgcaactcggaagaatactagaatccttgtgtgtgcaccttcaaat
agtgcagcagaccacattctggaaaaactcctcaatgcaaaggctggtacagcagttcga
gagaatgaaatattcaggctcaatgcatcttcccgtccttatgaagatgtcaatcctaac
catattgacttctgcttctttgatgacgataccttcaagtgtcctgaactccgtgtcttc
gtgcgctataggatcatcatatcaacctatatgagtgcctctctgcttcatgcagaaggt
gtcccacgaggccacttctctcatattatcttggatgaggcaggccaagcttcagaacca
gaaaccatgatcccaatatcgaatctctaccatcggaatacagtagttgttcttgctgga
gaccctaagcaattaggtccaatcataaactccagccaagcagaatcctttggtttgggg
agatcatacttggagagaatattcgaatgtgagttttatagtaatggggataaaagctat
gtaacaaaattggttaggaattatcgatgccacccagaaattttgtatctccctaacatg
ttgttctatggacaagagttgattgcttgtaaagatgactcagttcccttcatggcaagg
gtggaccttcttcctaacaaggatttccctgttcttttctttggcatcgaaggctgtgat
gagagggaaggaagtaatccatcgtggtttaatcggactgaggcaagtaaggtagtagag
gtcactaagcaattgactgcaaaaaggaatttgagtgaggaagatattgggatcatagca
ccttatcggcagcaagtactaaaactgaagaaagctttcgaaaatttggagatgcctaac
atcaaggttggaagtgttgagcaatttcagggacaagagagacaagttataataatatca
actgtccgatcaacaatcaaacacgatgaatttgacagaagatactgtttgggatttttg
agcaatccaaaaaggtttaatgtggctattactcgtgctaaagctttgctaattgtaatt
gggaatccgcacatcatcagcaaggacccaaactggaacaggcttctatggcgttgtgca
gacaactcatcctatctgggctgtaacccccctgagaggcaggagcttgtttatgaggac
ccacaggaagatctcttaaacaatgaaggaaacacttggtgctctggagatgatgggtgg
gctcgagactcctggcaaagagaagttccccatcctgtcatggaagggtccaggcaaaca
gaagctccccaacctgtcgtggatgacgaagctgaatggtctgatggctggaagtaa
DBGET
integrated database retrieval system
