Prunus dulcis (almond): 117614885
Help
Entry
117614885 CDS
T07328
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdul01002
]
117614885
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdul04121
]
117614885
Enzymes [BR:
pdul01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117614885
Peptidases and inhibitors [BR:
pdul01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117614885
Ubiquitin system [BR:
pdul04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117614885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
117614885
NCBI-ProteinID:
XP_034199701
LinkDB
All DBs
Position
1:39676844..39684719
Genome browser
AA seq
1114 aa
AA seq
DB search
MHVVGDLGFRSLVLVACFLVPAIGFFVVRRKWRLAKARTEEIKRLLILAKEEAARAEFEV
AAGYAAVSVAENKGSYCAVCYCPTTTRCARCKAVRYCSGRCQIIHWRQGHKEECHPPSHQ
SIDGEGDAGLNVAKKDLEINTDKIENRQSVERFSEEPALPNPGCAPEIQCITDDDSEDEF
LSDRKGTNSTSESSATSFSGFSTSASCTGSSDDASVSESVSSCESDRPDGHPSANDALDM
LHTSFNVDNIDQSKPLSPKFASLVDSVNGFAKLGKLSQAKPSCNDGENERRSNCSSDLNK
SSRSEGPVTESCTPSSGFWGRTLDSVGSSSDVQVSNSSVASNSKVAGFGSSLQFSFNLSG
NTAPALRTLGSGSSGTILGDACTDCSELNKSIYVADLSEKISGDAPKVRNSPSRNCKGSN
NEVNGSSSDLHALKSRAVNSAPSSLPAVHKSIRTERVSKGTDALNSSRVLPTSLERSNHA
VNNCGRTSNLSKSREVGYPPSVSDARLASAVESSSLPCVKAGKVDFVEARDAVSSQVTNS
SNDRNGLKTSVFKVFDQFRGSKISKHYPVGVGTEIAGKHIEKELFPYELFVKIYNWNKVE
LRPSGLINCGNSCYANAVLQCLAFTPPLTAYLLQGLHYKVCVKKEWCFMCEFESLVSKAK
EGKSPLSPMAILSQLRNIGSQLGNGREEDAHEFLRYAIDMMQSVCLMEAGDNASRSLKEE
TTLIGLTFGGYLRSKIECSKCQGKSERQERMMDLTVEIEGDIGTLEEALRRFTSTETLDG
ENKYQCSRCKSYEKAKKKLTILEAPNILTIALKRFQSGKFGKINKPIRFPEILDLAPYMS
GTSDKSPIYRLYGVVVHLDIMNAAFSGHYVCYVKNSHNKWFKIDDSTVTAVELENVLMKG
AYMLLYSRCLPRAPRLIRNRIISPDPKHRAIPSWISGKTTNLKPKSVPPHSSVDPFLASS
NPPEDTTSSQLKRILEEDSSSDNSSLISNNSDEGSCSTDSTRDSSSADDLSDYIFGDSGR
GWNSPWRNFSDSDTSSSSSSSPSSTKHSPLSDSNRYASDGAMTVPFLNSDTSKQCRKLAS
SSSRNRETDSERLGPDSLRDVKFKKSSRERTVNI
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtggttggggatctagggtttcggagcctcgtgctggtggcttgttttttggtg
ccggcgatcggcttcttcgtggtccgaaggaaatggcgcctcgcgaaggccagaacggag
gagatcaagaggcttttgatcttggccaaggaggaagctgctagagctgagtttgaggtc
gcggctgggtacgccgccgtttcggttgctgagaataaaggttcttattgcgctgtttgt
tactgccccaccaccacgcgctgcgcccgctgcaaggcggttcggtactgttctgggagg
tgtcaaattattcactggcgacaaggtcacaaggaagaatgccatcctcctagtcatcaa
agtattgacggggaaggtgatgctggcctgaacgtggccaagaaagaccttgaaattaat
actgacaagattgaaaataggcagtcagttgaaagattctctgaggaacctgcattgcct
aatcctggttgcgctcccgaaattcaatgtataacagatgatgatagtgaagatgaattt
ctttccgacaggaaaggaacaaattctacttcagaatcatcagctacctctttttctgga
ttttctacttctgccagctgtactggatcttcggatgatgcttctgtcagtgagagtgtt
agttcatgtgaatctgacagaccagatgggcatccatctgctaatgatgcccttgacatg
ctacacacttcctttaatgtcgacaacattgatcaatctaagccattatctccaaaattt
gctagcttggttgattctgttaatggttttgctaaattaggtaagttaagtcaggctaaa
cctagttgcaatgatggagagaacgagcggagatcaaattgttcttcagatttgaacaaa
agtagcaggagtgagggtccagttactgagtcttgtacaccatcttctggtttctggggg
agaacgctcgattctgtagggtccagtagtgatgtccaggtgtccaattccagtgtagcc
agtaatagcaaggtagctggttttgggtcttccttacagttttctttcaacttgtctgga
aatactgctcctgccctgcgtacgcttggctctgggtcaagtggcactatactaggcgat
gcttgtacagattgttcagagctcaacaagtcaatttatgtagctgatttatcagagaag
atcagtggagatgctcctaaggtcaggaactccccatcccggaactgtaaagggtcgaat
aacgaggttaatggatctagcagtgatttacatgccttaaagtccagagcagttaattct
gcgccatcctccttgcctgctgttcataaatctattcgcaccgaaagagtttcaaaaggt
acagatgctttgaattctagtagagtgctacccacaagcttggaacggtccaaccatgct
gttaataactgtggcagaacttcaaatctttcaaagtctagggaagttggatatccaccc
agtgtttctgatgctcgtcttgcatctgctgttgaaagttcttcacttccatgtgtaaaa
gctggaaaagttgattttgttgaggctagggatgctgtttcatctcaagttacaaattct
tcaaatgataggaatggcttgaaaacgtctgtgtttaaagtttttgatcagtttagagga
tctaaaatatcaaagcactatcctgtgggagttgggacagagattgcaggaaaacatatt
gagaaggaactttttccatatgaattatttgtcaagatttacaattggaacaaggtggaa
ttgcgcccttctggccttataaattgtggtaacagctgttatgccaatgcggtgctccag
tgcttggcattcactccacctctgactgcttatttgcttcaaggactccattataaagtt
tgtgtaaagaaggaatggtgtttcatgtgtgagtttgaaagtctagtttcgaaggcaaag
gaaggaaaatcccctctgtctcctatggcaatactctcccagttaagaaatattggaagt
caacttggtaatgggagagaagaagatgcccatgaatttctaaggtatgctattgatatg
atgcaatctgtttgccttatggaagctggggataatgcatcgcgctctttgaaagaagaa
acaactttaataggccttacatttggaggctaccttcgatcaaagatagaatgctcaaag
tgccaaggaaagtctgagcggcaggaaagaatgatggatcttactgttgagattgagggt
gatataggaaccttggaagaggctcttcgacggttcaccagtactgagaccttggatggg
gagaacaaataccaatgtagcagatgcaaatcgtatgagaaggccaaaaagaagttgaca
atactggaagctcccaatatccttaccattgcactgaagcgttttcagtcgggaaaattt
gggaagatcaataagcctattcggtttcctgagatcttggacttggcaccttatatgagt
ggtacaagtgataaatctccaatatatagactctatggggtggttgttcacttggatatc
atgaatgccgcattttctggtcactatgtgtgctacgtgaagaactcccacaacaagtgg
tttaagatcgatgacagcacggtaacagctgttgaacttgaaaacgtcttgatgaaaggg
gcatacatgcttctttattcgaggtgcttgccgagggccccgagattgataagaaacaga
ataatatctcctgatcccaaacatagagccattccttcctggattagtggaaagactacc
aatttgaaaccgaagtctgtcccgccacattctagcgttgacccattcttagccagttca
aatcctccggaggatacaacgagttctcagctgaaaaggattttagaagaggactcatca
agtgacaattcttcccttatcagcaacaactctgacgaaggttcttgtagtactgatagc
actcgtgattcttcaagcgccgatgacttgtccgattatatatttggtgattcaggacgt
ggttggaatagcccttggaggaatttttcggattctgacacttcctcctcatcctcttcc
tcaccctcaagtacgaagcattcaccactctctgattcaaaccggtatgcttcagatggt
gcaatgactgttccttttttgaattctgacactagtaaacagtgtagaaagttagcaagt
agtagtagtagaaatagggaaactgactcggagagattaggacccgactctttaagggat
gtaaaatttaaaaaatcaagtagggaaagaacggtaaacatttga
DBGET
integrated database retrieval system
