Prunus dulcis (almond): 117614982
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Entry
117614982 CDS
T07328
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03082
ATP-dependent chromatin remodeling
pdul03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117614982
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117614982
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdul01009
]
117614982
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117614982
03036 Chromosome and associated proteins [BR:
pdul03036
]
117614982
Protein phosphatases and associated proteins [BR:
pdul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117614982
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
117614982
SWI/SNF complex
117614982
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
117614982
PBAF complex
117614982
SWI/SNF complex
117614982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
117614982
NCBI-ProteinID:
XP_034199832
LinkDB
All DBs
Position
1:complement(19429769..19433223)
Genome browser
AA seq
269 aa
AA seq
DB search
MKGQASSSYKGAVKFRMPTAQNLVPIRLDLDVDGQKFKDTFTWNPSDPDSEIVVFARRTA
KDLKLPPGFITVIASAIQSQIADFRSLEGQDMYPGERIVPIKLDLRVNHTLIRDQFLWVS
FNSRLFHLIFSIPPALTLGFIRFEGFQDLNNFESDPEEFAKTFCGDLGIQDPEVGPAIAF
SIREQLYEIAVQSVASARENRISKKGRRGAEYTPVSKAGSTGLDLVKLFGQKSSVVRKRK
EWDVYEPIVDLLSSEEVDALQAKEERLTR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtcaggcgtcgagttcctacaaaggcgctgtcaagttcaggatgccgacagcc
cagaatttagtaccgattcgcttggacctcgatgtcgatggccaaaagtttaaagacact
ttcacttggaacccatctgaccctgactcagagattgtggtgtttgcgagaaggacagca
aaagacttgaagcttcctccgggtttcattacagtcattgcttctgccattcagtcacag
attgcagactttcggtcgttggaaggccaagatatgtacccgggcgagaggattgtgcca
attaagcttgatcttcgagtgaaccatactcttattagggaccagtttttgtgggtgagc
ttcaacagtcgtttgtttcatcttatcttttcaatacctcctgctcttacacttgggttc
atccgtttcgagggatttcaggacttgaacaactttgaaagtgatcctgaagagtttgct
aaaacattctgcggagatttaggtattcaagatcctgaagtggggcctgcaattgccttt
tcaattagggaacaactgtatgagattgcagttcaaagtgtagcatcagcaagagaaaac
agaataagcaaaaagggacgccgaggggctgagtatactccagtcagtaaagcaggtagt
actggattggacctggtgaagttattcggtcaaaaatctagtgttgttcggaaaaggaag
gagtgggatgtatacgagcccattgttgatcttctatctagcgaggaagtggatgccctt
caagcgaaagaagaaaggcttactcggtga
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