Prunus dulcis (almond): 117615200
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Entry
117615200 CDS
T07328
Name
(RefSeq) autophagy-related protein 18b isoform X1
KO
K17908
autophagy-related protein 18
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
117615200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117615200
03029 Mitochondrial biogenesis [BR:
pdul03029
]
117615200
Membrane trafficking [BR:
pdul04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117615200
Mitochondrial biogenesis [BR:
pdul03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117615200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_Vps41
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
BCAS3_WD40
Beta-prop_IFT140_1st
Beta-prop_RSE1_2nd
WDR54
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
117615200
NCBI-ProteinID:
XP_034200130
LinkDB
All DBs
Position
1:complement(8270888..8276309)
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AA seq
371 aa
AA seq
DB search
MANQSSSSYPILCASFNQDTSCFAIGTKDGFKIFDSNTGRLCYERAIGAFVIVEMLFSSS
LLAIVGAGEEPSLSPRRLCLFNTTTGTALRELNFLTSILAVRMNKKRLVVILQDKTYVYD
INSLGILDTIDTIPNLKGLCAFSPSLEGCFLALPASISKGSVLLYNVMDLHLHCEIDAHR
APLAAMALSSNGTYIATASEQGTIIRVHLVSEATKSYSFRRGTYPSTIFSLSFGPSTQLP
DILVGTSSSGSVHAFSLGFSIYQSRSKRSGSFLGSIIPGSVTDALDPAHHDVLHNAAPAG
VKSYAVIRKVDKVADTSTSEIVACRATISIITYNGYFQEYNLSINNQNEFSWSLEREFKL
LTVISDDAISS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggccaatcagtcctcctcttcttacccaatcctttgcgcttccttcaatcaagacacc
agttgctttgcgattgggacaaaggatggcttcaaaatattcgattccaatacagggagg
ctctgttacgaacgagctattggagctttcgttattgttgaaatgctatttagctccagt
cttcttgccattgttggagctggtgaagagccatctttatcgccacggcgtctctgtttg
ttcaacaccacaactggaactgctcttcgagaattaaattttttgacttcaatacttgct
gttcgcatgaataagaaaagacttgttgtcattttacaggacaaaacatatgtatatgac
ataaatagtctcggaatcttggacactattgatactataccaaatttaaaagggctttgt
gcattctctccaagtttggaagggtgcttcttggctcttcctgctagcatctccaaggga
tctgtgttgttgtacaatgtcatggacctgcatttacattgtgagatagatgctcatcga
gccccacttgctgcaatggctctttcttccaatgggacgtacatagcaacagcatctgaa
caggggaccattataagagtccatctagtctcagaagcaactaagtcttatagctttcga
agagggacatatccgtcaactatattttctttgtcatttgggccatctacgcaactgcca
gatattcttgtcggcacaagttcttcaggttctgttcatgctttctctctggggttctct
atttatcaaagcagaagcaaaagatcaggaagttttcttggatcaattatacctggctct
gttacggatgcattggatccagcccatcatgatgtacttcataatgctgcaccagcagga
gtcaaaagctatgccgtgattcgaaaggttgacaaggttgctgatacatcaacttcagaa
attgtggcttgcagggcaactatttccattataacatacaatgggtacttccaggagtac
aacttaagcatcaacaatcagaatgagttctcatggagtttggagcgtgaattcaagcta
ctgaccgtcatctcagacgatgccatcagctcctga
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integrated database retrieval system
