Prunus dulcis (almond): 117615357
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Entry
117615357 CDS
T07328
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117615357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdul04121
]
117615357
03036 Chromosome and associated proteins [BR:
pdul03036
]
117615357
Ubiquitin system [BR:
pdul04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
117615357
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
117615357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
eIF2A
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
RMC1_N
Ge1_WD40
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_VPS8
WDR54
Pep3_Vps18
ATPgrasp_ST
Motif
Other DBs
NCBI-GeneID:
117615357
NCBI-ProteinID:
XP_034200318
LinkDB
All DBs
Position
1:8169470..8172999
Genome browser
AA seq
454 aa
AA seq
DB search
MDAGSMSSSSKLKSESSWPLRQQLLQERNSRENLDRFIPNRSAMDFDFAHFMLTEGRKVK
KNPAMVSSPSNEAYRKQLAESMNMNRTRILAFKNKPPAPVELFPRKFSSLPQDKLAKPRR
HIPQTSERTLDAPDLVDDYYLNLLDWGSCNVIAIALANTVYLWDATNGSTSEVATFEDEV
GPVTSVSWAPDGRNIAIGLDNSEVQLWDSTANKQLRTLRGCHRSRVGSIAWNNHILTTGG
MDGCIVNNDVRVRSHIVETYRGHEQEVCALKWSASGQQLASGGNDNLLHIWDRSVASSNS
PTQWLHRLEDHTAAVKALAWCPFQGNLLASGGGGGDRCIKFWNTHTGACLNSVDTGSHVC
ALLWNKNERELLSSHGFTQNQLTLWKYPSMAKIAELTGHTSRVLYMAQSPDGCTVASAAG
DETLRFWNVFGVPEVAKPAPKSNPEPFAHFNRIR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggatcaatgagttcttcgtctaagttgaagtcagagtcaagctggcctctt
cgacaacaacttcttcaggaaaggaattctagggaaaatctggacaggttcatccccaac
agatcagcgatggattttgattttgcacactttatgctgactgaaggtaggaaagttaag
aaaaacccagctatggtatcttccccatccaatgaggcctatcggaagcagttggcagag
tccatgaacatgaacaggactcgaatcctagctttcaagaacaagcctccggcccctgta
gagctcttcccacgcaagttctcttcattaccacaggacaaactggcaaagccccgaagg
cacattcctcaaacttcagagaggacattggatgctcccgatcttgtggatgattactac
ctgaatttgttggattggggaagctgcaatgttatcgcgatagctcttgcaaacacagtt
tatttgtgggatgctaccaatggttctacttcggaggtcgccacatttgaggatgaagtc
ggacctgtcaccagtgtgagttgggcgcctgatggacgcaacattgcaattggactggac
aattctgaagtacagttgtgggattcgactgctaataagcagctgagaactttgagaggt
tgccacagatcacgagtaggctctattgcatggaacaatcacattcttacaactggagga
atggatggctgtatcgttaataatgatgtaagagttagatcacacattgttgagacatac
agaggacacgaacaagaggtttgtgcgcttaaatggtcagcctcaggccagcaattagct
agtggaggaaatgataacctcctccatatatgggacagatcagtagcatcttcaaattca
ccgactcagtggcttcacaggcttgaagaccatacagctgcagtgaaagcccttgcttgg
tgtcctttccagggcaacttattagcttctggtggaggtgggggtgatcggtgcataaag
ttttggaacacccacacaggtgcatgcctgaactcggttgacacgggctctcatgtttgt
gctttgctgtggaacaagaatgaaagagagctgcttagttcacatggatttacccaaaat
cagcttactctttggaagtacccttcaatggctaaaattgcagaactcactggccatact
tctagagttctttatatggctcagagcccagatggttgcacagtggcatcagcagctggt
gatgaaacactcagattctggaatgtttttggggttcctgaggtggctaaaccagctccc
aaatctaaccctgagccttttgctcatttcaatcgtatccgctga
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