Entry |
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Name |
(RefSeq) cryptochrome-1 isoform X1
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KO |
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Organism |
pdul Prunus dulcis (almond)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pdul00001]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
117615456
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SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
1:38938975..38943837
|
AA seq |
679 aa
MSGGGCSVVWFRRDLRVEDNPALAAGVRAGSVVCVFIWAPEEEGPYYPGRVSRWWLKHSL
AHLDSSLRSLGTSLITKRSTDSVSSLLEVVISTGATQLFFNHLYDPISLVRDHRAKEVLT
AQGIAVRSFNADLLYEPWDVNDVNGRPFTTFDAFWGRCLSMPYDPDAPLLPPKRIISGDT
SRCPSDTLVFEDESEKGSNALLARAWSPGWSNADKALTTFINGPLLEYSQNRRKADGATT
SLLSPHLHFGELSVRKAFHLVCIKQVLWANEGNKAGEESVNLFLKSIGLREYSRYISFNH
PYSHERPLLGHLKFFPWIINQSYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSS
FFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGTIPDGREFDRIDNPQFEGYKFD
PNGEYVRKWLPELARLPTEWIHHPWNAPESVLQAAGIELGSNYPLPIVGIDAAKTRLQEA
LLEMWQHEAASRAAVENGTEEGLGDSSESTPIAFPQDIQMEENYEPVRNNLPATRRYEDQ
MVPSMTTSLVRVEEEESSLEIQNLVEETRGEVPTNEMVNQEPRRDTLNQGVLQTIRNNTL
PQPNAAIGLQHAIEDSTAESSGSSRRERDGGVVPVWSPSTSSYSEQFASDDNSIGTSSYL
RRHPQSHQIMNWRRLSQTG |
NT seq |
2040 nt +upstreamnt +downstreamnt
atgtcaggtggtggatgcagtgtagtctggttcaggagagatctgagggtggaagataac
ccagctttagctgctggagtgagagcaggaagtgtggtttgtgtctttatttgggcacct
gaggaagaaggcccatattacccgggaagggtgtcaagatggtggctcaaacacagcttg
gctcatcttgattcctctttgagaagtctgggcacatctctcatcaccaagaggtccact
gacagtgtttcttctcttcttgaggttgttatttccactggtgccactcagctcttcttc
aaccacttatatgatcctatatcactggttagggatcaccgggccaaggaggttttaact
gctcaaggcatagctgtgcgttcctttaatgcggatttgctctacgaaccatgggatgtt
aatgatgtcaatggtcgcccgttcaccaccttcgatgctttttggggaagatgccttagc
atgccatatgacccagatgcaccgcttctcccccctaagagaattatatcaggtgacaca
tcaaggtgcccttctgatacattggtttttgaagatgaatcagagaagggaagcaatgcg
cttcttgctcgagcttggtcacctgggtggagcaacgctgataaggctctgaccacattt
ataaatggaccattacttgagtactctcaaaaccgcaggaaggctgatggtgccacaaca
tcattactttctccccatttgcattttggggagctaagtgtgagaaaagcatttcatctt
gtttgcatcaagcaggttctttgggccaatgaaggcaacaaggctggtgaagagagtgtg
aacttgtttctgaagtctattggtcttagggaatattcaaggtacattagttttaatcat
ccttacagtcacgaaagacctcttcttgggcacctaaagttcttcccctggattataaat
cagagctattttaaggcatggaggcaaggtagaactggctatccattggtggatgctggc
atgagagagttgtgggccacaggctggctgcatgatcgtatacgagtagtagtttctagt
ttttttgtaaaggttctacagcttccatggaggtggggaatgaagtatttctgggataca
ctcttagatgctgatcttgaaagtgatgctcttggttggcagtatatatctggtactata
cccgatggtcgtgaatttgaccgcatagataatccacagtttgaaggttacaaatttgac
ccaaatggagaatatgtgcgaaagtggcttcctgaacttgccagacttccaactgaatgg
atacaccacccatggaatgcaccagaatctgtactccaagcagctggaattgaattagga
tcgaattaccctctccctattgtaggaatagatgcggcgaaaaccaggttgcaagaagca
ttattagagatgtggcagcacgaagctgcttcaagagctgctgttgaaaatggaactgaa
gaagggcttggagattcctctgaatcaaccccaattgcctttcctcaagacatacaaatg
gaggaaaattatgaacccgtgaggaacaaccttcctgccacccgaaggtatgaagatcag
atggtcccaagcatgactacatctttggtgagagttgaagaggaagaaagttcattggaa
attcaaaatttggtggaagaaaccagaggagaagtgcctacgaatgaaatggtgaatcaa
gaaccaagaagagacactttaaaccaaggggttttgcagactattcgtaacaacactctg
ccacaaccaaatgccgcaatagggctgcaacatgctattgaagattccactgcagaatct
tccggtagcagtaggagagagagggatggaggggtagttccagtctggtctccttcaact
tctagctactcggagcagtttgcaagtgatgacaatagcattggaacaagttcttacttg
cgaagacatccacagtctcaccaaataatgaattggaggcggctatctcaaactgggtaa |