Prunus dulcis (almond): 117615991
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Entry
117615991 CDS
T07328
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117615991
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdul03032
]
117615991
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117615991
DNA replication proteins [BR:
pdul03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
117615991
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
117615991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
117615991
NCBI-ProteinID:
XP_034201078
LinkDB
All DBs
Position
1:37149399..37156721
Genome browser
AA seq
983 aa
AA seq
DB search
MLKTTTFKGANVFMSRNLVPPEIFDALHDALKLNGANVFLCCDPSRTGPDDYHVIASSDH
EKFEDLRAKGCNLLGPQCVFSCANQHRALPKQGFTCCLAMDGFKVLASGFEGDEKAKIEK
LVTAMGGVLHAKASLDVNFVIVKNVLAGKYKWALNTLKKPIVTINWLSQCWNEHRNVPQD
SFRVLPFSGLMISVTRIPADERKEIEKLITENGGKYSAELTKKCTHLISDVPEGDKYKVA
QRWGHIRIVTRKWFDQSISRRACLNEDSYPVQGGSISSNKSVRGCFTLQNSQRSSSGNLQ
SVPPSVVADSNLTAAPCSGTMDSDLEATVSQNMTTMFSHAPHVVKNEDSKAPPLESKSEA
YLDGCVADDSQSEDNDLYLSECRISLVGFKVSEMRRLVNMIRRGGGSRYMSFNDKLTHIV
VGTPSEIQKKEVRGFAALGVIHVVRTTWLDDCDREKKEIPVLPKHIAYDLVLPEGALIGM
TSMIQGTISTTHLSIPSDQLHGNTSAATGMGSLEKKREKKPEINMKGDKSMEAAVGPSKW
SKLPVINGKSKVQLNNTIDGRLTMQYDSSVQNGKESSVFKGRLFCFSNSFPEDRRGDIIQ
WVNQGGGDVVDGDLKQKVHFTIECHGVITSSVDVAQTTYVSSHWIRSCLEDGCLLDVSSH
ILYAPLPCRIPLPGFENFRFCVSQYEEKDRLLLRNLCFVLGAKFGEKLTKKVTHLLCKFT
NGPKYQAACIKGIHPITAEWVYECVKKNKVVALDQFYPKKVTAEDREAGLCTMSQYPTQA
VQMISAGNSSECPSQSQDLRTSSGENIGSRNDSLREEASEPSFCNKKARVSEDDGEKGLL
SSGVHLRIPACTTGDRKVKSSGEVSQVVPDVASAIEDLLEQTSKIHDQKSPGRSLCDSSI
FSPECSALRQDHSDSHSVIGLSRHWLNRAGKKDDIHYPSEEQKAGLYDGFSETQTESQVV
GYEEDLSGRQMLIDRVRTRSSLA
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagacgacgacgtttaagggagccaatgtcttcatgtcgcggaacctggtcccg
cccgagatcttcgacgcccttcacgacgctctcaagctcaatggagccaatgtcttcctc
tgttgcgacccctcgcgaaccgggccggacgactaccacgtcatcgcttcctccgatcac
gaaaagtttgaggatcttagagccaagggctgtaatttgctcggccctcaatgcgtgttt
tcttgtgcaaaccagcacagggctctgcctaaacaagggtttacttgttgccttgcaatg
gatggtttcaaagtacttgcctctggttttgagggtgacgaaaaggctaagatagagaag
ttagtaacagcaatggggggagttttgcatgctaaagcatctttggatgttaactttgtt
attgtgaaaaatgtcttggctggaaaatacaagtgggccttgaatacattaaagaagccg
attgtcactattaattggttatctcagtgctggaatgagcatcgtaatgttcctcaagac
tcctttagggttcttcctttttctggtttgatgatctctgtaaccagaattccagcagat
gaacgaaaggagattgaaaagcttatcacagaaaatggtggaaagtattctgctgaactt
acaaagaagtgcacgcatttaatttctgatgttccagaaggtgacaaatacaaggttgca
caaagatggggccatattcgtattgtaactcggaaatggtttgatcaatctatttctaga
agagcttgtcttaatgaggactcctatcctgttcaaggtggttctatatcttcaaataaa
agtgtaaggggttgctttactttgcagaatagccaaaggagcagtagtgggaacttgcaa
tctgtgccaccatcggtggttgcagattcaaatttgacagctgctccttgttctgggacc
atggattctgatttagaagctactgtctcacaaaacatgaccactatgttttctcatgct
cctcatgttgtgaaaaatgaggatagtaaagcacctcccttggagtccaaaagtgaagct
taccttgatggttgcgttgctgatgattctcagtctgaagacaatgacctgtacttgtca
gaatgtagaatatctcttgttggctttaaggtttctgaaatgcgtaggttggttaatatg
attcgcagaggtgggggttcccgatacatgtcattcaatgataaattgacacacatagta
gttggaactccttcagaaatccaaaagaaagaagtgaggggttttgctgctttaggcgta
attcatgttgtcagaactacctggcttgatgactgtgatcgtgagaaaaaggagatccct
gttctcccaaagcacattgcctatgatctagttctgcctgaaggagcactgataggtatg
actagcatgattcaaggtacaatctctaccactcatctaagcataccttctgatcagtta
catgggaatacgagtgctgcaactggaatgggatcgttggagaaaaagagagaaaagaaa
ccagaaattaacatgaaaggtgacaaatccatggaagcagctgttggaccatctaaatgg
agtaaactacctgtcataaatggcaaaagtaaggttcagttaaacaatacaattgacggt
cgactgacgatgcaatatgattcaagtgttcaaaatggcaaggaatcatctgtctttaag
gggagattattttgcttttcaaattcctttcctgaagataggagaggtgatatcattcaa
tgggtaaatcaaggaggaggagatgtagttgatggtgatttaaaacagaaagtacacttc
actattgagtgtcatggtgtgataactagttctgtggatgttgctcaaactacatatgta
tcaagtcactggatccggtcttgtttggaggatggttgcttgctggatgttagtagtcac
attctatatgctccacttccctgccggattcctttgcctggatttgaaaactttcggttt
tgtgtttcgcaatatgaagagaaagacagactgttactaagaaatttgtgttttgtactt
ggagctaaatttggggaaaagctgacaaagaaggttacccatttactatgcaagtttacc
aatggaccaaagtatcaggctgcttgtataaaggggatacacccaattacagctgagtgg
gtatatgagtgtgtgaagaagaataaagtcgttgctcttgaccaattttatccaaaaaaa
gtcactgctgaagatcgagaggcagggctgtgtactatgagtcagtatcctacacaagcc
gttcaaatgatatctgcaggcaattcatctgagtgtccaagtcaatcacaagacctgaga
acctcatcaggagaaaacattggcagtagaaatgacagcctcagggaagaggccagcgaa
ccaagtttttgcaataagaaggcaagggtttcagaagatgatggcgaaaagggtctactt
tcgtctggggtacatttacgtattcctgcctgtaccactggagacagaaaagtaaaaagt
tctggtgaagtttctcaagtggttcctgatgtagcttctgctattgaggacttgttggag
cagacaagtaagattcatgatcagaagtcaccagggaggagtttgtgtgatagcagtatt
ttttcaccggagtgttcggctcttcgtcaagaccactctgattctcactccgtcattgga
ttatcgagacactggttaaacagggctgggaaaaaagatgacatccactatccttctgaa
gaacaaaaagctggcttgtatgatggctttagtgaaacacagaccgagtctcaggttgta
ggctatgaggaagatttgtcgggccggcaaatgcttatagacagagtacgaacccgtagt
agcctggcttga
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