KEGG   Prunus dulcis (almond): 117616040
Entry
117616040         CDS       T07328                                 
Name
(RefSeq) uncharacterized protein LOC117616040 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
pdul  Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pdul04121]
    117616040
Enzymes [BR:pdul01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117616040
Ubiquitin system [BR:pdul04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    117616040
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-rbx1 RING_XB3-XBAT31 zf-RING_10 Prok-RING_4 zf-RING_4 Rtf2 zf-Nse zf-ANAPC11 zf-RING_6 Zn_ribbon_6
Other DBs
NCBI-GeneID: 117616040
NCBI-ProteinID: XP_034201133
LinkDB
Position
1:13104607..13108319
AA seq 273 aa
MGFVIPRKQERPKLCSIYYPLVSSTALSIGRSFTLNFSPYTPEVFVSKLIIQLVSMSIEG
SSEFQRWNVRDVAMGRIIDLDLNYPPPNENMALTGSLGLQVQGIGHYQGQATAAADFVDD
EVVIISPRKFAEATNNSRRNPSRRSRRVIEGLSEGAEFYTRLSELTNFRAFSQLGASNWE
VSVNVDVRNKPEYTATNVPMPPVVPQSEFLPEAPGFTCAICIGQLIEETSTKCGHIFCKK
CIEKAIATQHKCPTCRHKLRKRDILRIYLPNSS
NT seq 822 nt   +upstreamnt  +downstreamnt
atgggttttgtaataccaagaaagcaagagaggccaaaactttgctcaatatattatcct
ctcgtctcatccaccgctctctctattgggcgttctttcacattgaatttctctccctac
acaccagaggtttttgtttcaaaactgataattcagcttgttagcatgagcatagaagga
tctagtgaatttcaacggtggaatgtgagagatgttgcaatgggaaggataatagatttg
gaccttaattatccacctcctaatgagaacatggctctaactggttctttgggactacaa
gttcaaggaattgggcattatcaaggacaagctacagctgctgcggattttgtggatgat
gaagttgttataatctcaccaaggaaatttgcagaagccacgaataattcacgacgaaat
ccttctcggagaagccgtagagtcatagaaggtctttctgaaggtgcagaattctatacc
aggctttcagaattgacaaatttccgtgcctttagccaacttggagcttccaactgggag
gtttcggtcaatgttgatgttcgtaacaaaccagagtatactgcaactaacgttcccatg
cctccagttgtgccccagagtgagttcttgccagaggcacctggtttcacttgtgcaatc
tgcataggccagttgattgaagaaacatcgacaaagtgtggtcacatcttctgcaagaag
tgcattgagaaagccatagctactcaacacaaatgccctacctgcaggcataaacttaga
aagcgagatatcctcaggatctaccttccaaacagcagttaa

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