Prunus dulcis (almond): 117616191
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Entry
117616191 CDS
T07328
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117616191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117616191
03036 Chromosome and associated proteins [BR:
pdul03036
]
117616191
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
117616191
Coactivators
SAGA/TFTC/STAGA complex
117616191
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
117616191
STAGA complex
117616191
TFTC complex
117616191
SAGA complex
117616191
SLIK complex
117616191
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
EIF3I
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
DSE1_N
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_WDR75_1st
ASA1
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR41
PAC11
WDR90_beta-prop_4th
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
CFAP251_N
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_NWD2_C
LisH_PAC1
LisH_SSDP
Dimer_MINDY4_N
PALB2_WD40
LisH
Cytochrom_D1
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
117616191
NCBI-ProteinID:
XP_034201325
LinkDB
All DBs
Position
1:complement(31538530..31543679)
Genome browser
AA seq
673 aa
AA seq
DB search
MDEESVRKFVAAYLKKKGFKQTENAFQEELNKNTNNSSSPISFNSQFDPDVAKHILSFSE
FEDGPAKYQDGYAKLRSWTYSSLDLYRHELLRVLYPVFIHCFMDLVAKGHVQEARTFFNS
FREDHEMMHLRDLQKLEGVLSPSHLREMEFAHSLRQSKVNIKICQYSYELLLQFLHKSQS
TTMLGIINEHINFQVSPGQPSSISDDAESVTLTGSSQDSANQINQKEIHWGLLEDSFEER
LEKAGGLLLESEKAEGETKEGDWDENKKKSIEGAKQGSSIKKLKKDKAAGATGKNARPEA
TPVATAPRVKAELTLPVIPTEVEQSILEDLRNRVQLSSAALPSVSFYTFINTHNGLNCAS
ISHDGSLVAGGFSDSSLKVWDMARIGQQGVDSLQGENGTTSSEQVLGSNGGKRPYTLFQG
HSGPVYSATFNPLGDFILSSSADSTVRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFA
SASHDRTARIWSMDKIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQTGEC
VRIFIGHRSMVLSLAMSPDGRYMASGDEDGAIMMWDLSSGRCVTPLTGHTSCVWTLAFSG
EGSLLASGSADCTVKLWDVTASTKLPKTEENKSGNTSRLRSLKTLPTKCTPVYSLRFSRR
NLLFAAGVLSKTV
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagagcgtacggaaatttgtggcagcatacctcaagaagaaagggttcaag
caaacggagaacgctttccaggaagaacttaacaaaaacaccaacaactcttcgtctccg
atctctttcaattcccaatttgaccccgacgtcgccaagcacatcctctccttctccgaa
tttgaggatggtcctgcaaagtatcaagatggatatgccaaattgaggtcatggacttat
agttcactggatttgtacaggcatgagttacttcgtgttctttatccggtatttattcat
tgtttcatggatctggttgcaaaaggtcatgttcaagaagctcggacatttttcaatagc
tttcgtgaagaccatgaaatgatgcacctacgagatctacagaagttggagggagttcta
tctccttctcatttgcgggagatggaatttgctcattctctcaggcagagcaaagtgaac
ataaagatttgccagtactcctatgagcttctgctgcagtttctacacaagtcacaatcc
accacaatgctcgggattatcaatgagcatatcaacttccaagtttctcctggacaaccc
agctcaatttctgatgatgctgagtctgtaacacttactggaagcagccaggattcagct
aatcagataaaccagaaggaaatacattgggggttgctcgaagattcttttgaagaacgt
ttggaaaaggctgggggcttgcttttagagtctgaaaaagcagaaggggaaaccaaagaa
ggggactgggatgagaataagaaaaaatcaattgaaggagctaaacagggttcttcaatc
aaaaagttaaaaaaggacaaggctgccggtgcaacgggcaaaaatgcacgccctgaggca
acccctgtcgctacagcaccaagagtcaaagcagagcttactttgccagtaattccgaca
gaggttgaacagtctattcttgaagacttgagaaaccgtgtacaattgagtagtgctgct
ctgccatctgtcagcttttatacatttattaacacacacaatggtttaaactgtgcatct
atatcccatgatggatccttggttgctggtggattttcagactcatcactgaaggtatgg
gatatggcaaggattgggcaacaaggtgttgattctttgcagggtgagaatggaaccact
tcaagtgaacaagttcttgggtcaaatggtggaaaaagaccatatactttgtttcagggt
cattcagggccagtttattcagctactttcaatcctcttggcgattttatactttcctct
tcagcagactcaactgttcggttgtggagcacaaaactaaatgcaaatcttgtttgctac
aagggtcataattaccctgtgtgggatgttcagtttagtcctgtaggccactattttgca
agtgcttcacatgatcgaacagcaaggatttggtctatggacaaaatacagcctttgaga
ataatggcagggcacttatctgatgttgattgtgtacaatggcatgccaactgcaactac
attgccactggttctagtgacaaaacagttcgattgtgggatgtacagactggagagtgt
gtccgaatattcattggtcacaggagtatggttttgtctctggcaatgtcacctgatggt
cggtacatggcttctggtgatgaagatggtgcaatcatgatgtgggacctttcaagtggc
cgctgtgttacacctttgacgggtcacacctcatgcgtgtggacacttgctttcagtggt
gaaggttcgcttcttgcttctgggtctgctgattgcactgtaaaactatgggacgtaact
gcaagtacaaagttgccaaaaactgaagaaaacaaaagtggaaataccagcagactgaga
tcattgaagactttaccaaccaagtgtacccctgtctactcgttacggttttctcgaaga
aaccttctatttgcggccggggttctctcaaaaactgtataa
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