Prunus dulcis (almond): 117616200
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Entry
117616200 CDS
T07328
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul00040
Pentose and glucuronate interconversions
pdul01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
117616200
Enzymes [BR:
pdul01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
117616200
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
117616200
NCBI-ProteinID:
XP_034201333
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Position
1:24187585..24189800
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AA seq
443 aa
AA seq
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MAKLFNSYILLFFFFLSFAAIIANAESDQPQQLDEYWKKRAEQAENYTMESYEPNPQRVT
DEFNAQVGELIMGKNETRRNLKGQKKYVGPCKVTNTIDSCWRCDPNWANNRMKIVDCIQG
FGRKTTGGKGGPIYVVTDPSDGDLVNPRPGTLRHAVIQKGPLWITFARNMVIRLQQELMV
ASDKTIDGRGANVNIFDGAGITIQFVRNVIITNLHIKQIKAKEGGIIRDSVDHFGQRTKS
DGDGISIFGSSNIWIDHVSMENCTDGLIDAIMGSTGITISNCHFTKHNEVLLFGASNSYT
QDKMMQITVAFNHFGKGLVQRMPRCRHGFFHVVNNDYTHWLMYAIGGSMNPTIISQGNRF
IAGLNSATKEVTKREYTAEAEWKNWLWKSEGDLFMNGAFFVESGSPANLRADKLDMIPFK
PGTYVTKMTKFAGALDCFVGKPC
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaattatttaactcatatatccttctcttcttctttttcttatcctttgctgca
attattgccaatgccgaaagtgatcaacctcaacaattagatgagtattggaaaaaacga
gctgagcaagccgaaaactacaccatggaatcttacgaaccaaatcctcagagagtcacc
gacgagttcaatgctcaagttggcgagcttataatggggaaaaacgagacaagaaggaac
ttgaagggccaaaagaaatatgttggtccatgcaaggtaaccaacacaattgactcctgc
tggaggtgtgaccctaactgggccaacaaccgcatgaagatcgtggactgtatccaaggc
ttcggtcgcaagaccaccgggggtaaaggcggacctatttatgtcgtgactgatccctca
gatggcgacttggtaaaccctagaccgggaaccctgcgtcacgccgtgattcaaaaaggg
cctctttggatcacctttgcacgcaacatggtgattaggctgcagcaagagctgatggtg
gccagtgacaagaccattgatggtaggggagccaatgttaacatatttgacggtgctggc
attaccatccagtttgtgaggaatgtgatcatcaccaaccttcacatcaaacaaattaag
gccaaagaaggtggaattatcagagactccgtcgaccattttggtcagaggaccaagagt
gatggtgatggcatctccatcttcggctcctccaacatttggattgaccacgtttccatg
gaaaattgcacagatgggctcatagacgccatcatgggttccaccggtatcaccatctcc
aactgccacttcactaagcacaatgaggtgctgttgttcggtgccagcaacagctacact
caagacaagatgatgcaaattactgtggccttcaaccactttggtaagggtttggtgcag
aggatgccaaggtgccggcacggattcttccacgtggtgaacaacgactacacccactgg
ctcatgtatgccattggtggcagcatgaaccctaccatcatcagccagggtaacaggttc
attgctggtttaaactccgccaccaaagaggtgacgaagagggagtatacggcagaagcg
gagtggaagaattggctttggaaatctgagggagatttgtttatgaatggagcattcttt
gttgaatctgggagcccagccaatttgcgcgcagacaagcttgatatgattcccttcaag
cccggtacctacgtcacaaaaatgactaagtttgccggcgctcttgactgctttgtgggc
aaaccatgttag
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