Prunus dulcis (almond): 117616316
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Entry
117616316 CDS
T07328
Name
(RefSeq) pre-mRNA-splicing factor 38-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117616316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117616316
Spliceosome [BR:
pdul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117616316
Complex C
U4/U6.U5 tri-SnRNP related factors
117616316
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
117616316
NCBI-ProteinID:
XP_034201476
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All DBs
Position
1:complement(21799129..21802524)
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AA seq
377 aa
AA seq
DB search
MANRTDPSAKSIRGTNPQNLVEKIVRSKIYQNTYWKEQCFGLTAETLVDKAMELDHIGGT
FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNDDYKYVRILGAFYLRLTGTDTDVYQYL
EPLYNDYRKLRRKLADGNYALTHVDEVIDELLTKDYSCDIAMPRIKKRWTLEATGSLELR
KSALEEDFEEEEEKEENDQLDGMDDEVHDRDYYRGRSPIRERDRDRRRDSHRYRDHDYDR
DYDRDRDYDRERGHGRERDRNRDRDRDRDRYRLRDEKDLGRDRGRDRRERDRGRRRSYSR
SRSRSRDREGGDNRKRHGRSSMSPRRRDGHDEHGTREESKKKKEKKEKKTDGTDHPDPEI
AEANRLRASLGLKPLKM
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacagacccgtcggccaagagcataagggggacgaacccgcagaacctg
gtggagaagattgtacggtcgaagatataccagaacacgtactggaaggagcagtgcttc
gggttgacggccgaaaccctagtggacaaagccatggagctcgaccacatcggtgggacc
ttcggaggtaaccgtaagcccacgcctttcatgtgcctcgtgatgaagatgcttcagatc
cagccggagaaggagatcgttattgagttcataaaaaacgacgactacaaatatgtccgg
atacttggtgcattttatttgcgtcttacaggcacggatactgatgtgtaccagtaccta
gagcctctgtacaatgactatcggaagttgaggagaaaattggctgatgggaattatgcc
ttgacgcatgtggatgaggttattgatgaacttctgacaaaagattactcatgtgacatt
gcgatgccacgaattaagaagagatggactctggaagcaactggttcattggaactcaga
aaaagtgctttggaggaggactttgaggaggaggaagagaaagaggagaacgatcaactt
gatggaatggatgatgaagtccatgatagggattattatcgtggccgaagccctataagg
gaaagggacagggatagaagacgcgacagtcacagatacagggaccacgattatgacaga
gactatgatagggatagagactatgatagggaacgcggacatggacgagaaagagacagg
aatagagacagagatagggatcgggaccgttatcgactaagagatgaaaaggatcttggt
cgcgatagggggcgggataggcgagagagggatcgtggcaggaggaggagctattcaagg
agcagaagtcggagtagggatcgtgagggtggggataatcgcaaaagacatggccgcagc
agcatgagtcccaggagacgggatgggcatgatgagcatggcactcgtgaggagtcgaag
aagaagaaagaaaagaaggagaagaagactgatgggacagaccatccagatccagagatt
gctgaagcgaacaggctccgtgcatctcttggattgaaacctctgaagatgtga
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