Prunus dulcis (almond): 117616473
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Entry
117616473 CDS
T07328
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117616473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117616473
Membrane trafficking [BR:
pdul04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
117616473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
117616473
NCBI-ProteinID:
XP_034201691
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Position
1:29886080..29893753
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AA seq
789 aa
AA seq
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MILDGIGDEEKWLAEGIAGIQHHAFYMHRALDANNLRDALKYSALMLSELRTSRLSPHKY
YDLYMRAFDELRKLEMFFKDESRHGVSIVDLYELVQHAGNILPRLYLLCTVGSVYIKYKE
APAKDVLKDLVEMCRAIQHPMRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVMDAVDFVL
QNFTEMNKLWVRMQYQGPGRVREKHEKERSELRDLVGKNLHVLSQIGVELELYKDTVLPR
VLEQVINCKDELAQYYLMDCIIQVFPDEYHLQTLETLLAAFPQLQPTVDIKTVLSQLMER
LSNYAASSTDVLPEFLQVEAFSKLSSAIGRVIEAQIDMPIVGSISLYVSLLTFTLRVHPD
RLDYVDQVLGACVKKLSGTTKLEDNRAIKQVVALLSAPLEKYDDIVTALTLSNYPRVMDH
LDNGTNKVMAVVIIQSIMKNNSCISTADKVEVLFELIKGLIKDLDCTSADELDEEDFGEE
QNSVARLIHMLYNDDPEEMLKILCTVKKHIMSGGPKRLPFTVPPLILSALKLVRRLQGQD
GEVVGEEMPATPKKIFQILNQTIEALSSVPSPELALRLYLECAEAANDCDLEPVAYEFFT
QAFVLYEEEVADSKAQVTAIHLIIGTLQRMNVFGVENRDTLTHKATGYSAKLLKKPDQCR
AVYACSHLFWVDDQDGVKDGERVLLCLKRALRIANAAQQMASVTRGSSGPVTLFVEILNK
YLYFFEKGNPQITSAAIQGLVELIKTEMQSDSTNVSPAPDAFFSSTLRYIQFQKQKGGVM
GEKYSPIKV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgatattggacggaatcggagacgaagagaaatggctggcagaaggaatcgccggcatt
caacaccatgccttttacatgcatcgtgctctggacgcgaacaatctcagagacgctctc
aaatactcggccctgatgttgtctgagctccgaacctcgaggctttcgcctcacaaatac
tacgatctctatatgcgagccttcgatgaattgaggaagctggagatgttcttcaaagac
gagagcagacatggtgtttcgattgttgatctctacgaacttgttcagcatgctggcaac
atattaccaagattgtatctcctatgtacggtaggttctgtgtacattaaatataaggaa
gcacctgccaaggatgtgcttaaagatcttgtggaaatgtgtcgtgccattcaacatcca
atgcgtgggctctttctaagaagctatctttctcaagtcagtagagataagttacctgat
attggctctgagtatgaaggagatgctgacactgtcatggatgctgtagattttgtgcta
cagaatttcacagagatgaataagctttgggttcgaatgcagtatcagggacctggtcgg
gtgagagagaagcatgaaaaggaaagaagtgaacttcgtgatcttgttgggaaaaatcta
catgttctcagtcagataggcgtggaacttgaattgtataaagacactgttcttcccaga
gtattagaacaggttatcaactgtaaagatgagctggcccaatattatttgatggattgc
ataatccaggtctttccagatgagtaccacttgcagacactggagacattattggctgca
ttcccccagcttcagccaacagttgatatcaagactgtgttatctcaattaatggagagg
ttatcaaattatgctgcgtcaagcacagatgtattacctgaatttcttcaagtggaagcc
ttctctaaattaagcagtgctattgggagggtgatagaagcgcagattgacatgcctatt
gttggatccatatctctttacgtctctcttcttacatttacactccgtgttcatcctgat
cgccttgattatgtggatcaagtactgggagcatgtgttaagaagctatctggaacaacc
aagcttgaggacaatagagccataaaacaggttgttgcgctgttaagtgctcccttggaa
aaatacgatgacattgtcacagccctcacactgtctaattatcctcgagttatggatcat
cttgacaatggaacaaataaagtcatggcagtggtcattattcaaagcattatgaaaaac
aattcttgtatctccaccgctgataaggtggaggtgttgtttgaattaattaagggactc
atcaaggatttggattgtacttctgcagatgagcttgatgaggaggattttggagaggaa
caaaattctgttgctcgccttatacacatgctttataatgatgatccagaggaaatgtta
aagatcttatgtacggtcaagaagcacataatgagtggaggaccaaagcgcctacctttt
actgttcctcctcttatattatctgcactcaagttggttaggcggctgcaaggtcaggat
ggagaggtagtcggagaagagatgcctgccacaccgaagaaaatttttcagattttaaat
cagactattgaagctctttcctcagttccatctcctgaactggcgttaaggttgtacttg
gaatgtgctgaggctgctaatgactgtgatcttgaacctgttgcttatgaattcttcact
caggcgtttgtattatatgaagaagaagttgcggattccaaagcccaggtgactgcaata
catctcattattgggactctccagaggatgaatgtatttggcgttgagaacagggatact
ttaacacacaaggccacagggtattcagcaaagcttttgaagaaacctgatcagtgccga
gcagtgtatgcgtgttcacatcttttttgggttgatgatcaggatggtgttaaagatgga
gaaagggtcttgctttgtttaaagcgtgccttgagaattgcaaatgctgctcagcagatg
gccagtgtaactcggggtagcagtgggccagtcacgctctttgttgagatactgaacaag
tacctctatttctttgagaaaggaaacccccagattacaagtgctgcaatccagggattg
gtggagttaattaaaactgagatgcaaagcgactctacaaatgtgagtccagccccagat
gcatttttcagcagcacattgcggtacatacagttccagaaacagaaaggtggggtaatg
ggcgagaaatattcccctatcaaggtctga
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