Prunus dulcis (almond): 117616505
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Entry
117616505 CDS
T07328
Name
(RefSeq) uncharacterized protein LOC117616505
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117616505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117616505
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117616505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Utp12
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_ACSF4
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
Beta-prop_VPS8
WDR90_beta-prop_4th
PQQ_2
Beta-prop_IFT122_1st
Beta-prop_Vps41
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
117616505
NCBI-ProteinID:
XP_034201731
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All DBs
Position
1:complement(10187649..10193470)
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AA seq
629 aa
AA seq
DB search
MSLSNIRDLLTAFSPSLDLFAISSGDGRIKIWDTVKGQVQTEFTDIVSSEDTSIYAKRER
GHLSVDYTCMKWFSSERKKKRKLGCSLLVLGTGGGDVLALDVSAGQLKWRLNDCHAGGVS
SISFPRNASCIYTAGADGMICEIDALTGNLLGKFKASTKAISSMSVSFDGKILATAAAQM
KIFSLSDHKKIQKFSGHPGAVRCMIFSEDGKYILSSAVGERYIAVWNIGGGKKQSASAVL
AMEHPAVFVDSRFIDNGEVGDMGLYVLAISEVGVCYFWFGKNIEELRNAKPTRISVSSEG
ILTKTQKGAVTTIFAAVLQGIVKAASGQIFVAYGLPVKPLFQKILVHSGTDIKLSGSHDG
VLLPMSQSLVKSKKGQNVQNRVIALDRANAEDALLPIPKIFDSHEKKKRHEKLSFGKDEV
MADLDDSGSHGGLMKSKDDMVEFEADTAAICMEDRLRSLGILSKADDLIINSTLNSATFK
SIDLHTNMPQKKMRAAVLSLDPSDACKLLGVLVAMWQTRSSSGNYVLPWIYSILVNHSHH
IMSQEPETQMLSSLLKVTKSRGAAIQPLLQLSGRLQLVMAQIDKATHTKTQVLSHENQMD
ESEDEDEDVNEIHYGEEDDDSEISSDDDQ
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgtcaaatatcagagacctcttgacggcttttagtccgtctttggacttgttc
gccatcagctctggagatggtcgaattaagatttgggacactgtgaaaggtcaagtccag
acagagttcacagacattgtatcatcagaagatacaagcatatatgcaaaacgagaaaga
gggcacctctcagttgattacacatgcatgaagtggttctcttccgaaagaaagaagaaa
aggaagcttggttgttcattgttggttttgggaactggcggtggtgatgttttggcactt
gatgtgtctgctggtcaattgaaatggagactgaacgactgccatgctggtggcgttagc
tccatatcatttccaagaaatgcttcgtgtatttacaccgccggtgctgatgggatgatt
tgtgaaattgatgctttgacaggaaacctgttggggaagttcaaagcttccacaaaggca
atctcttctatgtctgtttcgttcgatgggaagatattagcaactgcggctgcacaaatg
aagattttcagtttgtctgatcacaagaagatacagaagttttctggccatccgggagct
gttcgctgtatgatcttcagcgaagatgggaagtacatcctctcatctgcagttggtgaa
aggtatattgcagtatggaatataggtggtggaaaaaagcagtcagcaagtgctgtgctt
gcaatggagcaccctgctgtctttgtagatagcaggttcatagacaatggtgaagttggt
gatatgggcctatatgtattagcgatttcagaagtcggtgtttgttatttttggtttgga
aagaatattgaagaattgcggaatgccaagcctacaagaatttcagtatcatctgaaggc
attttgaccaaaactcagaagggtgcagtaactacaatatttgctgcggttttgcaagga
attgtaaaagctgcttctgggcagatatttgttgcttatggattaccagtgaagccatta
ttccagaaaattttggtgcattctggcacagacataaagttgagtggctcccatgatggg
gttcttctaccaatgagtcagtctcttgtcaaatctaagaaaggacaaaatgtacaaaat
agagttattgcattggatcgtgcaaatgcagaagatgccttgcttccaattccaaagatt
tttgattcacacgagaaaaagaaaagacatgaaaaattaagttttggcaaagatgaagta
atggctgatttggatgacagcgggagtcatggtggccttatgaagagcaaagatgacatg
gtagaatttgaagctgacactgcagcaatttgcatggaggaccgactgagatcattaggg
atacttagcaaagcagatgaccttataattaactctacactcaactctgcaacattcaag
agtattgatcttcacactaatatgccacagaagaagatgagggcagctgttttgtcatta
gaccctagtgacgcgtgcaagttattgggagtcttggtggccatgtggcaaacaaggtct
agcagtgggaattatgttcttccatggatatatagcatattggtaaatcacagtcatcat
ataatgtcacaagaacccgaaactcagatgcttagctccttgctcaaggttaccaaatcc
agaggggcagctattcagcctttattacaattatcgggtcgtttgcaacttgtgatggca
cagattgacaaggcaacccacaccaaaactcaagtcttatcgcacgagaaccaaatggat
gaaagcgaagatgaggatgaagatgtaaatgaaatccactatggtgaggaagatgatgat
tctgaaataagcagtgatgatgatcagtag
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