Prunus dulcis (almond): 117616512
Help
Entry
117616512 CDS
T07328
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
117616512
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdul04040
]
117616512
Ion channels [BR:
pdul04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117616512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Ion_trans
cNMP_binding
SR-25
Motif
Other DBs
NCBI-GeneID:
117616512
NCBI-ProteinID:
XP_034201740
LinkDB
All DBs
Position
1:complement(18973714..18986405)
Genome browser
AA seq
1008 aa
AA seq
DB search
MPNPDVTVVVEKSEEKDGRDSDSDSDSKSCSYSDTTSSGESSVEEWQISKEKWPNMKVKI
LEWKKKMFAKWKQIFATSCVFAVSLDPLFLYIPFINQDMNCLRLDQKLKIAALTLRSVTD
IFYIMDIIIEIYTSKICSSLTIELHHISKSEFLGNTFLPTLAKKIWQSYILIDILAILPL
PQVLILTFFSRMGASRSSETSKFIMNFFVLMQYIPRVIRIYLSCEAPKKSPRRETPIWVK
GVLNFFMYILASHILGAIWYFFAIQQMTACWQYACQNENGCDPNTFGCHYQTFKDDLCPI
SSPNATIFDFGIFLSILQSGVPSSTNFLQKFSNCFCWGLRNLSSLGSNLQPSTRTWENLF
VVFISITGLLLFIYLIGNLQTYLSLDTTRIQVHRHKMKIKRKMEAKGQELELWLPKNGIP
QRSQKDIKLQIMEKVEQEFEENRNVDLDNFLPTLPLDLENQIKSCMPLTRLKKVRVLQNM
DEQVLKAICQHLKPMKYSKNNLILREGEPLKMMIFIVEGHVAVEKKGGSISLQGARELCG
ENLLAWPFSTSFPQTLPTATESARAIGDVKALILMASDMKSVVFKFRVHFIKKYGKLKEK
LVNLHLGPVDTTPTLVETAPTYVEGSPTIFTSQELKKATKNYHESTRLGEGACGIVYKGL
LPDKRVVAIKKSMIIHSPSTSVNSINEGLILSQINHRNIVKLLGCCLEAKTILMVYEFTD
KGSLYHQIHKEGIGSGLSFELRMKIAAEIAGALAYLHAMSILHRDLKTINILLDKSYAAK
VSGFRGSRLVHEDHDQISTLVQGTLGYLDPEYIESATLTEKSDVYSFGVVLLELLTSQKA
VSFERSAVDRNLANFFLRSMEGGHLVQILDGEIINVGNFETAEEVSYLAKRCLKVRGEER
PCMKEVAAELEGIMRSMEKHPGGQANFSRSPKETDGLLGSPSNAYVVDVRGEGDDAGSSG
IIISAEDGKSMQNQIQMIEPYDAAVLMLRSMHGCLEKLWKIHGCAEHS
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaccccgatgtaactgtggttgtggagaagtcggaagagaaagatggacgtgat
tcagattcagactcggattcaaaatcatgctcatactcagatactacaagtagtggagaa
tcttccgtcgaagaatggcagatatcaaaagaaaaatggccaaatatgaaggtgaaaatt
cttgagtggaagaagaagatgtttgcaaagtggaagcagatttttgcaacatcatgtgtg
tttgctgtttcactggatcctttgttcctctacattcctttcatcaatcaggacatgaat
tgtctgagattggaccaaaagttgaagatagcagctcttacattaagatctgtaacagat
atcttttatattatggacatcattattgagatttatacatctaagatctgttcaagttta
accattgaacttcatcacatctccaaatcagaattcttagggaacacttttttgccgacg
ctagctaagaagatttggcagtcatacatcttaattgacattttagctattcttcccctt
ccacaggttctaatcctcactttcttttcaagaatgggggcttcgagatcctcggagaca
agcaagtttattatgaacttttttgttctgatgcaatatataccgcgggttattcgcatc
tacttatcgtgtgaggcaccaaaaaagtctccaagaagggagactccaatatgggttaaa
ggtgtacttaatttctttatgtatatccttgctagtcatatactcggagccatatggtac
ttttttgctattcaacaaatgacagcctgttggcaatatgcatgtcaaaatgaaaatggg
tgtgaccctaatacctttggttgtcattaccaaacattcaaagatgatttgtgtcctata
agttcaccaaatgcaacgatcttcgattttgggatatttcttagtatccttcagtctggt
gtgccgtcatcaacaaattttctacaaaagttctcgaactgcttttgttggggcctacga
aatttgagttctcttggatctaacctccaacccagtactagaacttgggaaaacctcttt
gtggtttttatttctataactggcttgctgctatttatatatctcattggaaatctgcag
acatatttgtccttggacactacaagaatacaggtgcatagacacaagatgaaaataaaa
cggaaaatggaagcgaaaggtcaagagctagaattatggttgcctaaaaatggcatccct
cagaggtcgcagaaggatataaagttgcagatcatggaaaaggtagaacaagaatttgaa
gaaaacaggaatgttgacttggataattttctccctactcttcccttggatcttgaaaac
cagatcaaaagttgtatgccgttgactaggttgaagaaggtgcgagtacttcaaaacatg
gatgaacaagtgttaaaagcaatttgtcagcatctcaagcccatgaagtattctaaaaac
aatctcattcttcgagagggcgaaccccttaaaatgatgatcttcattgtagaaggacat
gtagccgttgaaaagaaaggcggttccatttcgctgcaaggtgcaagagaattatgtgga
gaaaatcttctagcttggccgttctcgacctcttttcctcagacgttacccacagcaaca
gagtctgctagggcaattggtgatgttaaagcccttattctaatggccagtgatatgaag
agtgtcgtctttaaattcagggtgcatttcatcaaaaagtacggaaaactcaaagaaaaa
ttggtcaatcttcatctaggacctgttgatacaacaccaacattggttgagacagcacca
acatatgttgagggatcgcccacaatctttacttcacaagaacttaagaaggccacgaaa
aattaccatgaaagtacaaggcttggtgaaggagcctgtggaatagtttacaaagggtta
ctaccagataaaagagttgttgccataaaaaagtccatgattattcattcgccatccacg
agcgttaactccattaatgagggtcttattctttctcagatcaaccacagaaacatcgtc
aagcttttaggttgttgtttagaggcaaaaacgattttaatggtttatgagttcacggac
aaagggtctctctatcatcaaattcacaaagaaggcataggatccggactctcatttgaa
ttaagaatgaagatagcagcagaaattgccggggcattagcatacttgcacgccatgtca
atcctacaccgggatttgaagacaataaatatattattggataaaagttacgcagcaaaa
gtttcaggcttcagaggttcacgattggttcacgaagatcacgatcagatatcaacttta
gtgcaagggacactcggatacttagatcctgaatacattgaatcagcaacgctaacagaa
aagagcgatgtctacagctttggagttgtcctattggagcttctaacaagtcaaaaggca
gtgtcttttgaaaggtctgccgtagacagaaatctagcaaacttctttcttcgctcaatg
gaaggaggtcacttagttcaaattcttgatggtgaaataatcaacgtgggaaattttgag
acagccgaagaagtaagctatctggcaaaaagatgcttgaaggttagaggggaggaaagg
ccttgtatgaaagaagtagccgccgagctcgaggggataatgcgaagcatggaaaagcat
ccaggaggacaggctaatttttctcgatctcccaaagaaactgacggtttgcttggttcg
ccttcaaacgcttatgttgtggatgttagaggtgaaggtgatgatgctggttctagtggt
attattatcagtgcggaggatggcaagagcatgcaaaatcaaatccaaatgattgagcct
tatgatgctgcagtgctgatgctgaggtccatgcatgggtgccttgagaagttgtggaag
attcatgggtgtgctgaacattcctag
DBGET
integrated database retrieval system
