Prunus dulcis (almond): 117616765
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Entry
117616765 CDS
T07328
Name
(RefSeq) DNA repair protein XRCC4-like isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117616765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117616765
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117616765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XLF
XRCC4_CC
Takusan
VPS38
Motif
Other DBs
NCBI-GeneID:
117616765
NCBI-ProteinID:
XP_034202065
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All DBs
Position
1:2235129..2237424
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AA seq
259 aa
AA seq
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METPSPKHTCLKLQLKEAQQPIYVKGTWFESRFDLSITDGLNAWICHASEEQVRDRAAQW
DQPVSEYVALAERYLGFQHPDSAYGFADAGDGHKRLSWTFEKEGTKLEWRWKCQPSPNSK
QTTAAVLDFLMDANVGLSEEVVRKTQSFERLKVEAEKCLAQSEKLTNEKIEFESAIYAKF
LGVLNSKKAKLRELRDKISKQEIAGKLPEEEEASSDQTEPFVSIDEKSEDESLKDLPVTS
KDVPRTRSRGRGRKRAADN
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggagaccccgagccccaagcacacgtgcttaaagctccaactcaaagaagctcaacaa
cccatctacgttaagggcacgtggttcgagtcccgcttcgacctctccatcaccgacggc
ctcaacgcttggatctgccacgcgtcggaagaacaagtgagagaccgagcggctcagtgg
gatcagccggtctcggagtacgtggcgttggccgagcgctacctagggtttcagcaccca
gactccgcctacggcttcgccgatgccggcgacggccacaaaagattgtcatggactttt
gagaaggaagggaccaagctagaatggcggtggaaatgtcagccatcgcctaatagtaag
caaaccacagcagcagtattggattttctcatggatgcaaatgttgggctaagtgaagaa
gttgtgagaaaaactcaatcatttgagagattgaaagtggaagctgagaagtgtctagca
cagagtgagaagcttaccaatgagaagatagaatttgaatccgctatttatgcaaagttt
cttggggtcttgaattcaaaaaaagctaaactaagagagcttcgagataagatttcaaaa
caagaaattgctggaaaactgccagaagaagaggaagcgagttcagaccaaactgaacct
tttgtcagcattgatgagaaaagtgaggatgaatctttgaaagatcttccagttacctcc
aaggatgttccgaggactaggtctcgaggtcggggtcgaaagagggcagcggacaattag
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