Prunus dulcis (almond): 117617093
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Entry
117617093 CDS
T07328
Name
(RefSeq) lethal(2) giant larvae protein homolog SRO77 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117617093
Membrane trafficking [BR:
pdul04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117617093
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117617093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_VPS8
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_RIG_2nd
PEP5_VPS11_N
Synaptobrevin
Beta-prop_WDR3_2nd
Beta-prop_RSE1_2nd
Beta-prop_WDR5
WDR55
Clathrin_propel
NBCH_WD40
YMR265C_C
kleA_kleC
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
117617093
NCBI-ProteinID:
XP_034202234
LinkDB
All DBs
Position
2:complement(22370778..22378751)
Genome browser
AA seq
1119 aa
AA seq
DB search
MFAKLFNKSSPQAASHPRTRVRQADLDPRVTVHYGIPSTASILALDRTQSLLAIGTLDGR
IKVIGGDNIQELLTSPKPLPFKNLEFLQNQGFLASVSSENEIQVWDLEQRRIASSLQWEC
NITAFSVIYGTNYMYIGSEYAIVSVLKYDVEDGKIKLLPYYITVNFIAEAAGMSLPDHLS
VVGVLHQPNSLGNRLLVAYENGLIILWDASEDRVVLVRGSKDLKVKEKTVTSSPKDTRNE
LSDATEESKQVEKEISSLCWVSDNGSILAVGYVDGDIMFWDLSTAASTKDQKSEESDNNV
AKLQLSSGDRRLPVIVLHWSANMLHKHHRGQLFVYGGDEIGSQEVLTVLSLDWSSGIESL
KCISRTDLTLNGSFADMALLPTAAAMESSNTLLVILTNQGQLQVYDKACLSALMSEEQEK
TAVPAVQYPMFIPTIEPYMTVAKLALVNTDKECSSAVSEQILVGKINAEDTSTTSGTKWP
LTGGVPSQLNDAENYHVERVYVAGYQDGSVRIWDATYPALSLICVLGSEVKGIRSTVASA
TVSALDFCSVSLRLAVGDECGLVRLYKIIGGSDGTRLHFVTTTEKEVHDLQQGKGPQCMA
VFSILDSPICILQFANFGGRLAVGFECGRVAMLDISTLSVLFLTDSVSNSSSPVICLAMK
SFSDTSSSLQSPEDSESKNLGDPGNGLTFIMTRNGHIVVIDSSSGNMISSWPMHSQKEST
AVSMHIIEDGDVLCDVSSEKHSLEVSPRNEAKSDRAQTSADSGSTQLDIEPDTSTETAYF
AQRLLNVSVLLCCENTLQLCSLKSVLEGDGNSTQEVDLVKPCCWTTVFKKDGKDGGLIVF
YQTGVFEIRSLPNLEVVGELSLMSILRWNFKTNMDKTICSSDHGQIILVNGCELAFLSLL
SDENEFRIPGSLPCLHDKVIAAATDVIASLSLNQKQQVSVPGILGGIIKGLKAGKMEQSM
DATANHENFCQTLENLFSSPPFLKPSTAVKDDQKILELNIDDLVINEPVAPVAISSSSSF
EKNKNEKKDKGTEKARLFEGATSDTKPKMRTAEEIKAKYRDTGDVAAAAAHARDKLAERQ
EKLEKLSQNSEELRSGAEDFASMAKELAKRMENRKWWHI
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgttcgctaagctcttcaacaagtcatcgccacaagcagcttcacatcctcggacaagg
gtcagacaagcggatttggatccgcgcgtcacggttcactatgggataccatccactgca
tccattctcgcacttgatcgcacacaaagcctgttggcaattggaacactggatggtagg
ataaaagtgataggtggtgataacatccaagagcttcttacatcaccgaagccgttgcct
tttaaaaatttagagttcttacaaaatcaaggttttctagccagtgtctcaagtgaaaat
gaaattcaggtttgggatttggaacagaggcgcatagcttcttctttacagtgggaatgc
aatataactgctttctctgttatttatggcaccaattacatgtacattggaagcgaatat
gcaatcgtctctgttctgaagtatgatgttgaagatgggaaaattaagttattgccatat
tatattactgtgaatttcatagctgaagcagctggaatgtcattgcccgatcatctttct
gttgttggagttctccatcaacccaattctttgggaaacaggctgctggttgcatatgaa
aatgggttgatcattctctgggatgcttcagaagatcgagttgttcttgttagaggttcc
aaggacctaaaagtgaaggaaaaaacagtcactagttctccaaaagacacaagaaatgag
ctttctgatgctacagaagaaagcaaacaggtggagaaagagataagctctctttgttgg
gtatctgataatgggtcaattcttgccgttggctatgtagatggtgatataatgttttgg
gacttatcaactgctgcctctaccaaggatcagaaatctgaagaatcagataacaatgtt
gcaaagcttcagttatcatcaggtgatagaagactccccgtaattgttttgcactggtct
gcaaatatgttacataaacatcataggggccaactctttgtctatggtggtgatgaaatt
gggtctcaagaagttctgacggttctaagccttgattggtcttcaggaatagaaagtctg
aaatgcataagccgtacagaccttacacttaatggttcattcgcagatatggctttatta
ccaactgctgctgcaatggagagtagcaacacgttgctagtcattttgacaaatcaggga
caactgcaagtctatgacaaggcttgcttgtctgctttaatgtctgaagaacaggaaaag
actgctgttccagcagtgcagtatcctatgttcatacccactattgagccatacatgaca
gtggcaaagcttgctctggtgaatacagataaggaatgctcatcagctgtgtctgagcaa
atcttagttggaaagattaatgcggaggacacttcaacgactagcggtacaaagtggcct
ttgactggtggtgttcccagccagcttaatgatgctgaaaattatcatgttgagagagta
tatgtagcaggataccaagatggatcagttcgaatatgggatgccacatatccagctctg
tcacttatctgtgttctaggatctgaggtaaaaggcatcagatctacggttgcaagtgca
acagtatcagcattggatttttgttctgtttctttacgattagctgttggtgatgaatgt
ggtctggttcgtctgtataagatcatagggggttcagacgggacaagattgcactttgtg
acaacaactgagaaggaagtacatgatttacaacaagggaaggggcctcagtgcatggcc
gtgttttctattcttgattctcctatatgcatcctacaatttgcaaattttggaggcaga
cttgctgtgggatttgaatgtggccgggttgccatgcttgatattagtacattgtcagtt
ttgtttcttacagacagcgtatccaactcaagttccccagtgatctgtctggctatgaaa
tcattttcagatactagtagctcattacagagtccagaggactctgagtccaagaatttg
ggtgatccaggaaatggattgacattcattatgaccagaaatggacatattgttgttatt
gacagttcctctggcaatatgattagctcttggccaatgcattcacaaaaggagtctact
gcggtttcaatgcacattattgaggatggcgatgttttatgcgatgtgtcgagtgaaaaa
cattcgttggaagtatctccaaggaatgaagcaaaaagcgatcgtgcacaaaccagtgct
gactctggaagtacacagcttgatattgaaccggacacctccacagaaactgcatatttt
gcgcagagattattgaacgtatctgttttactttgttgtgagaacacattacagttgtgc
tcattgaagtctgttcttgagggtgacggtaactccactcaagaggtcgatcttgtaaaa
ccatgttgttggactacagtcttcaagaaagatgggaaagatggtggactgattgtattc
tatcaaacaggagtctttgaaataaggtctttgccaaatcttgaagtggtgggagaattg
tcattaatgtcaattctaagatggaacttcaagaccaacatggacaagacaatatgttcc
tctgatcatgggcaaattattctggtaaatgggtgtgaattagcttttctatctcttttg
tccgatgaaaatgaattcaggattccggggtcattgccttgtcttcatgataaagtgatt
gcagctgctacagatgtcatcgccagtttatctcttaaccagaaacagcaggttagtgtc
cctgggattttaggtggtatcattaagggtttaaaagctggtaaaatggagcaaagcatg
gacgcaactgcaaatcatgagaacttttgtcaaactttagagaacttattttcaagtcct
ccattcttgaaaccttccacagctgtgaaggatgaccaaaaaattctggagcttaatata
gatgatcttgtaattaatgaacctgttgcacctgttgctatctcatcttcatcttcattc
gaaaagaacaagaatgaaaagaaagacaagggaacagagaaggcgagattatttgaaggc
gcaactagtgacacaaaaccaaaaatgaggacagctgaagaaatcaaggctaaatacaga
gatactggggatgtcgctgcagcggcagcacatgcaagagataagcttgcagaacgtcaa
gagaaacttgagaagctcagccaaaactcagaagaactgcgaagcggggcagaggacttc
gcatcaatggcaaaagaactcgccaagagaatggaaaatcgtaaatggtggcacatttag
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integrated database retrieval system
