Prunus dulcis (almond): 117617618
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Entry
117617618 CDS
T07328
Name
(RefSeq) uncharacterized protein LOC117617618 isoform X1
KO
K24155
rabconnectin-3a
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117617618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117617618
Membrane trafficking [BR:
pdul04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117617618
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
117617618
RAVE complex
117617618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_EML
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
117617618
NCBI-ProteinID:
XP_034202957
LinkDB
All DBs
Position
2:complement(18732342..18747126)
Genome browser
AA seq
2544 aa
AA seq
DB search
MPDVDLPSAVDPTHHLPLQFLPSDPTPPAPTRSDPPGCTLDWLPDFLDLSWVAYGASSLL
VISHFPSPLSDAETVIGPIFRQIFELSGDPSSAVEAVSWSPSTPSIGELAAAAENCVWVF
SHDSARSKGSFCWSQNAVLVQSTKVEAMRWTGSGDGIIAGGIDVVLWKRNGRSWEIAWKF
KADMPQSMVSATWSVEGPFATAAYQTEGLLTNKASKCVLVCQRVGKSGFLTSELHHPHLI
SMIQWRPLTGSLNRDAKHPPRQVLLTCSADGTARLWCEVDDGRGRKVGKDINDHKTMRCS
FSVAAVIEINQALNGILGTDIYLMWATEIGGVHKTSEGAKQIFFGKGYEQDQPGNCEWLI
GSGPGMLVNFWAIHCLDDVSPIRFPRVTLWKTQKLQGLKGGLSNYKDGIPLNKVVISRNC
LSGPPTLCSFVQLLPCNSLVWSQLYTQTSNNAEDISLNNSGTGNILSCSAGGLLNLDGHA
GRILQVAVHPYSCEVELAVSLDSCGLLLFWFFSTISNCILGRPTLIPTWELCGKLVTQGS
CSKYTSLRWAPSIVNEAVVLLMGHAGGVDCFVVKFHHNEEESIECHYLCTIPFTGHGPYE
NGPTSIFSIPLPSTCHKTLKSNKFMLLGVWMNGFQALSWEITLHSFDLSRSYCECQFDAG
SAPEGSMWRFETTFANERYCLNVKPCSSKIPDPHTHDDVSSFAVVCPGRLIRIEKSLAST
IDRCCPPYILATGCSDGSLKLWRSNMDKPSTPQIPWELVGMLVAHQGPISSICLSDCGRK
IATICKELPSNTISNLRIWDPVLLADAGTFMLEDTLSFGQDLVALNWLYCGNGQLLLGAC
TQNQLQVYSQQRCGGQTLLNSGKLLKKDIWVCIASTRTFPPIYDFFWGPRATAIFVHNSY
FCVNSQWLFPINKKHLANVDPNCPDYLGRMEEDIDSTVFIDCGLDQFKKILLGDSRRDCK
SGIPLEIDLKKDYLSSSLFLARAQLKCGSATKLGLWNMHEVIEKLNGSLPVYHPEALFMN
IYSGNWKRAYIALRHLNEFLSSNSSPERKYSPAKCSICVPQIPLSSFFDARISVYSNDRG
FQWSGDASLVTSSSQFQRNLDQFTYSLDSYASSNQLNSSSTKTELSDFVEPFEKLYKSAA
ISDMEKIQILSIIDLLIEMTNSHSGSAYESLDEPGRRFWVALRFQQLHSFRKHGRLASVE
ELVVDSKLIGWAYHSDCQENLFGSFLPNDPSWQEMRNLGIGFWFTNTAQLRSRMEKLARL
QYLKRKDPKDCALLYIALNRIQVLSGLFKISKDEKDKPLVGFLSRNFQEEKNKAAALKNA
YVLMGRHQLELAIAFFLLGGDTSSAVNICAKNLGDEQLALVICRLVEGRGGPLERHLITK
FMLPFAIEKDDYWLASLLEWELGNYSLSLIHMLGFQINSATEKHILSSNGVAFSDPNVGL
YCLMLATNNCMKNAVGERNIAILGRWAILTTATALNRCGLPLEALEYLSSLPTIRGDTDE
RGMSDLGHSENLHAILNPSPINSFNWLSSYVAFDLEFQGKLDLTLQYLSKLVREHPSWVD
IAFGSSEASTCVKGYENHEYVKVLESFQQKLYTAVHLLEQKFSVVPFHLISLILILLQDH
GLWFVGFDILHGYTSQHQELDKTQTVDRFLSYALMHKPLLKATRETSLLFSRVIGACGIT
CSILKSHYIEKNVSGDSRSMRSDSLGYYFQGLTLSLQSLRAALRFAFFSSTEDLTMKPLA
VIDLIEYYVQLAYAWHRKNSKVLLLLVQPLMITFTNGHTPYEVDMMTLKKLLPQIQEVVA
QNVSSDNVGLQVSQDRNITHSIPEDERWQIIGACLWQHISRLMKHKLNLLSYKLDDGCFS
GIPDRKHFSRLPSFENLQSDSNSVNELIELVSLSLLKLLKPTLAHVASYYVKQLASLLQH
KMDYGLHVRTLVWLEESNQSQTRALNQHLNQDIVKLDTIDERHESDMLWVTCADPKMISE
SFAEEKINWSHSLDRKPSKEWSNICRGITTVDETEEIPNHEVSLNSSSASTEAGSPAKSI
FRGGHSFLGAWQKDTTLTKEVTHFLNPKEIYKRNGELLEALCLNSIDQGQAALASNRKGI
LFFNWKDDVSFGDHSDYIWSEADWPLNGWAGSESTPAPTCVSPGVGLGSKKGAHLGLGGA
TVGVGSLTRPGRDLTGGGAFGIPGYAGIGASGLGWETQEDFEELVDPPATVENANTRAFS
SHPSRPFFLVGSSNTHIYLWEFGKDKTTATYGVLPAANVPPPYALASISALQFDHCGHRF
ATAALDGTICTWQLEVGGRSNIGPTESSLCFNSHASDVAYVTSSGSIIAVAGFSSNNVNV
VIWDTLAPPTTSRASILCHEGGARSLSVFDNDIGSGSISPLIVTGGKGGDVGLHDFRYIA
TGRSKRHRHSDKGEQVMKTSSNIDVHPGNGTKLGEQNQNGMLWYIPKAHSGSVTKISIIP
NTSLFLTGSKDGDVKLWDAKRAKLVYHWPKLHERHTFLQPSTRGFGGVVQAAVTDIKVVS
HGFLSCGGDGTVKLVQLKDHQHQT
NT seq
7635 nt
NT seq
+upstream
nt +downstream
nt
atgccagacgtagacctaccctcagccgtggaccccacccaccaccttcctctccaattc
ctaccatccgacccaactcctcccgccccgacccgatccgatccacccggatgcaccctc
gactggctgccggactttctagacctctcatgggtcgcctacggagcctcctcgctccta
gtgatctcccacttcccctccccactctccgatgccgaaactgtaataggacccattttc
cgtcaaatcttcgagctctccggcgacccctcgtcggcagtcgaagccgtctcttggtcc
ccgtccacgccctcgatcggtgagctagctgccgcggctgagaattgcgtttgggtgttc
tcgcatgattcggccaggtccaaaggttctttttgttggagccagaatgcagtacttgta
caatctacaaaggtcgaggcaatgagatggacgggctcaggggatggaattattgccggt
ggaattgatgtggttttgtggaaaagaaatggcaggtcttgggaaattgcttggaagttt
aaagcagacatgccacaaagtatggtctctgcaacgtggtctgttgaaggaccttttgca
actgcagcttatcagactgaaggattgttgaccaataaggctagcaaatgtgtgctagta
tgccaacgtgttggaaaatctggttttttgacatccgagctacatcatcctcatctgatc
tcaatgattcaatggaggccattaacaggaagtttaaatagagatgcaaaacatccaccg
aggcaagtgttactcacgtgtagcgcagatggaactgcaaggttatggtgcgaggttgat
gatggaaggggaagaaaagttggtaaggacattaatgaccacaaaacaatgaggtgttca
ttttctgtagccgctgtaattgagataaatcaggcactgaatgggattctaggcactgat
atatatctgatgtgggccacagaaattgggggtgtacataaaactagtgagggagctaaa
caaattttctttggaaaaggttatgagcaagatcaacctggtaactgtgagtggttaatt
gggtctggccctggaatgttggtcaatttctgggctatacactgtcttgatgatgtctcc
ccaataagatttccgcgggtcaccttatggaagacacaaaaactacaagggctaaagggg
ggactttctaattataaagatggaatacctcttaataaagttgttatctcgaggaactgc
ttgtctggtccaccaacattatgttcttttgttcagttattaccttgtaattccttggtt
tggtcacaattatatactcaaacttcaaataatgccgaggatatatcccttaataattct
ggtactgggaacatcttatcatgttcagctggtggactcttgaatttggatggtcatgct
ggaagaatcttacaagtagctgtgcatccttatagctgcgaagttgaattggctgtctct
ctagattcttgtggactgcttctattttggtttttttctaccatttccaactgcattttg
ggccgtccaacactaattccaacatgggagctttgtgggaaacttgtaacacaaggatca
tgttccaaatatacaagcttgaggtgggcaccgtcaatagtaaatgaagcagttgttctt
cttatgggacatgctggaggcgttgattgctttgttgtaaaattccatcataatgaggaa
gaaagtatagagtgtcactacttatgcacaataccttttacaggtcatggtccatatgag
aatggtcccactagtatcttttcaattcctttgccttcgacttgtcataaaaccctaaaa
tctaataaatttatgcttttgggtgtatggatgaatgggtttcaggctctttcttgggaa
atcaccttgcattcttttgatttatcaagaagctactgtgagtgtcaatttgatgctgga
agtgctcctgaaggcagtatgtggcgatttgaaactacttttgccaatgaaagatattgt
cttaatgtaaaaccttgttcgtcaaagataccagatcctcacacgcatgatgatgtttca
agttttgctgtggtctgtccgggtagattgatccgtatagaaaaaagtttggcttctact
attgatcgatgctgtcctccatatatactggctacaggctgctctgatggtagcttgaaa
ttgtggaggagtaacatggataagccatcaacacctcaaattccatgggaacttgtgggt
atgttagtggcacatcaaggacccattagctctatatgcttatcggattgtggtcgtaag
atagcaaccatctgcaaggagcttccttcaaatactattagtaatcttcgtatatgggac
cctgtactccttgcagatgcggggacttttatgttagaggatacattatcctttggtcaa
gatcttgttgctttaaattggctatactgtggaaatggtcagttactgcttggagcctgc
acacagaatcagttgcaagtatattctcagcagcgttgtggtggtcagactttattaaac
tctggaaaattattgaaaaaggacatctgggtttgcattgcgtctactcgtactttccct
cccatttatgacttcttttggggccccagagcaacggctatatttgttcacaatagttac
ttttgtgtaaatagtcagtggctgttccctataaataagaaacatcttgctaatgtcgat
ccaaattgcccggattatttgggtagaatggaagaagatattgattctacggtgttcatt
gattgtggacttgatcaattcaagaaaatattacttggtgacagtagaagagattgcaag
tccggtataccattggagattgatttgaaaaaggattatctgtccagcagcttgttttta
gcaagggctcaactgaagtgtggttcggctaccaagctaggtttatggaacatgcatgaa
gtgatcgagaagttaaatggatctctgccagtttatcacccagaggccctctttatgaat
atctattcaggaaattggaagcgtgcttacattgctctgaggcatcttaatgagtttctt
tcttctaattcttctcctgagaggaagtatagccctgcaaaatgtagcatttgtgttcca
caaattcctttgtcaagtttttttgatgcacgtatctcagtatattcaaatgacagagga
tttcaatggagcggtgatgcttctctagttacttcatcttctcagtttcaaagaaacttg
gaccaatttacatacagtttggactcctatgcttccagtaatcagttgaattcatcctca
acaaaaactgaacttagtgactttgttgagccttttgagaagttatacaagtcagcggct
ataagtgacatggagaagattcaaattctttctattatagatcttcttattgaaatgact
aattcacactctggttctgcatatgaaagtcttgatgaacctggacggaggttttgggtt
gcattgaggtttcagcaactacattctttcagaaagcatggtagattggcatctgtggag
gagttggttgttgactccaagttgattggatgggcctaccactctgattgccaggaaaac
ttatttgggtctttcctacctaatgatccatcttggcaagaaatgcggaatctgggtatt
ggattttggtttacaaatacagcacaattgcgttcaaggatggagaaactggcaagattg
cagtatctaaaaaggaaagatcctaaagattgtgcattgctatacatagcactgaataga
attcaagttttgtctggccttttcaaaattagcaaggatgagaaggataagccccttgtt
ggatttctttcacgtaattttcaggaggagaaaaataaggcagctgctttgaagaatgca
tatgtcttaatggggagacatcaactggaattagctattgctttctttctgcttggaggt
gatacttcttctgctgtcaatatttgtgcaaagaaccttggcgatgaacagcttgcgtta
gtgatttgtcggcttgttgaggggcgtggtggaccactagagagacacttaattacaaag
tttatgctaccatttgcaattgagaaggacgattattggttagcaagccttttggagtgg
gagctggggaattactctctttctttaatacacatgcttggtttccaaataaattcggca
actgagaagcatatactttcgtccaatggtgttgctttctcagacccaaacgttggtctg
tattgtctaatgctagcaaccaataattgcatgaagaatgctgttggtgagcgaaatatt
gcaatccttggcaggtgggcaatattgacgacagctaccgcgttaaacagatgtgggctt
cctcttgaagctttggagtacctttcatctctgccaaccattcgtggggatacagatgaa
aggggtatgtcagatcttgggcattctgaaaatctacatgcaattctaaatccttctcca
ataaattctttcaattggttatcaagttatgtggctttcgatctggagtttcaaggcaaa
ttagatttgacacttcaatacttatcgaagttggtaagagagcatccaagctgggtagat
attgcatttggatcttctgaagctagtacatgtgtaaagggatacgaaaatcatgaatat
gtaaaagttcttgaatctttccaacagaaattgtacacggcagttcatctgttggagcag
aagttttcagtggttcccttccatcttattagcctgattttaatattgctgcaagatcat
gggctatggttcgttggatttgatatattacatggatacacttctcaacatcaagagcta
gataaaacccaaacagttgacagattcttatcatatgctcttatgcataagccacttttg
aaggccaccagagaaacttcccttttgttttcacgcgttattggtgcctgtggtataact
tgctctatactgaagtcacattatattgaaaaaaatgtgtctggggacagtagatctatg
aggtcagattcattggggtattactttcaaggtcttacactgtcattgcagagtttaagg
gctgctttgagatttgcctttttctcctcaactgaagatcttaccatgaaaccccttgca
gtcattgatttgattgagtattatgtacagcttgcatatgcttggcatcgtaaaaactca
aaagttctcttactattggtgcaaccccttatgatcacatttactaatgggcatacacct
tatgaagttgatatgatgactctcaagaaactccttccccagattcaagaggttgtggct
caaaatgtttctagtgataatgtaggtcttcaggtttctcaagataggaatataacacat
tcaattcctgaagatgaaaggtggcaaatcataggggcttgtttatggcaacacatatcc
agactcatgaaacataagttgaatttgttgtcctataaacttgatgatggttgtttttct
ggtatacccgatagaaaacatttttcacgcttacctagctttgaaaatttacagtctgat
agcaatagtgtaaatgaactgattgaactggtgtccttgagcttgcttaagttattgaag
cccacacttgcacatgttgcttcttattatgtaaaacagctagcatcacttctgcagcat
aaaatggattatgggttgcatgtaaggactcttgtttggttagaagaatctaaccagtct
caaaccagagccctcaatcagcatctaaatcaagatattgtcaaattggacacaatagat
gaaagacatgaatctgacatgttatgggttacctgtgctgatcctaaaatgatatctgaa
agttttgctgaggaaaaaataaactggtctcactctcttgatcgtaaaccctctaaagaa
tggagtaacatatgtagaggcattacaactgtagatgaaactgaggaaattcccaatcat
gaagtttcgcttaacagtagttctgccagtactgaagctggatcacctgctaaaagtata
tttcggggtggccattctttccttggtgcctggcagaaagacacaacccttacaaaggag
gttacgcattttctaaacccaaaagagatatataagagaaacggggagcttttggaggca
ttgtgtctcaactccattgatcagggacaagctgcacttgcaagcaaccgaaagggaata
ttattttttaattggaaagatgatgtgtctttcggagatcattcagactatatctggtca
gaagccgattggccactgaatggatgggctggttctgaatcaacccccgctcctacatgt
gtttctcctggtgttggtcttggaagcaagaaaggtgcacaccttggactgggtggagca
actgttggtgtgggctccttgacaaggccaggaagagatttgacgggtggtggagcattt
gggattccaggttatgctggtattggtgcgtctggtttaggttgggaaactcaagaggac
tttgaggagcttgttgatccaccagctactgtggagaatgcaaatacgagggctttttcc
agtcacccgtctagacctttcttcttagttggttctagcaatacacacatttacttatgg
gagtttggtaaggacaaaactactgcaacttatggagtgctgcctgctgcaaatgtccct
ccaccttatgctcttgcatctatatcagctttgcagtttgaccactgtggacatagattt
gctactgctgccttggatggaactatatgcacatggcagctggaggtgggaggaaggagt
aacattggtcctacagagtcatctctatgctttaacagccatgcatctgatgttgcttat
gttacttcaagtggatcaatcattgctgttgctggatttagctccaataatgttaatgtg
gttatatgggatacattggctccacctaccacctcacgggcttctatcctttgtcatgaa
ggtggtgcacgctctctttctgtgtttgataatgacataggaagtggctctatctccccc
cttattgtgactggcggaaaaggtggtgatgttggacttcatgatttccggtacattgct
actggaagaagtaaaaggcataggcattctgataaaggtgaacaagtcatgaagacatca
tcgaatattgatgtgcatcctgggaatggtaccaagcttggggaacaaaatcaaaatgga
atgctttggtatataccaaaggctcactcagggagtgtcaccaagatatctataatccca
aataccagtttgttcttaacgggaagcaaagatggagatgttaagctttgggacgccaag
agagctaagttggtatatcactggccgaaattgcatgaaaggcacacatttttgcaacca
agcactcgaggctttggtggagtagtccaggctgctgtcacggatataaaagttgtctca
catggttttctctcatgtggtggagatggaactgtaaagcttgttcaactgaaggaccac
caacatcagacatga
DBGET
integrated database retrieval system
