Prunus dulcis (almond): 117617669
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Entry
117617669 CDS
T07328
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117617669
Membrane trafficking [BR:
pdul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
117617669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
117617669
NCBI-ProteinID:
XP_034203037
LinkDB
All DBs
Position
2:15282873..15291249
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AA seq
1430 aa
AA seq
DB search
MATTSFELEDQTDEDFFDRLVNDDIDFTGNVPSSVQNSEPDEVKAFSKLSISEAGSLGVD
ISGNGGFGVNGELGHEDRVVLESLDPLQDPVEVVKESKSPTPDSKNEFIALNDIADNGNE
ARALEDKADDRNEASALDDKAGDGNEAKALEHKGEEGAVDGAGSTSIVSAETGVKVVQWS
SFNSDLKPSAGNSDFFSEFGDYSEDPFANLGNTEKSWAESMVTNGVLENSVADLGASSYG
QNQGGQPCGATEEQDLDGEDLNGSQNWENLYPGWRFDPNTGQWYQLEGYDVSANTNTDVN
INANTQESFNVNSQSVDNVVFSDQKEDAYYFQQPAQSVSQSVAQGSETSTGSNWNEHSCG
NTDYPAHMVFDPQYPGWYYDTIAQEWKQLESSAPASDQSTSVEHNQQYHNTNVENHGSQS
LLNEQNVANWGGSVSTYDQQSASMWHTQNVAKSDTVSFPEKQQYATQYFSAEHVANSVNQ
QTGFNPSGSIALNEEVSHGYGISGGVGGFESFHPAGNFSQHHNQAKEPNQVMSFSPANFD
CQKPVHFSQQPVQSGSQFSHEARMGRSSAGRPPHALVTFGFGGKLIVMKDNSYSPANMTY
QSQDSVGGVINVLNLMEVVVDKTDAASFGTGCHDYFHALCQQSFPGPLVGGNAGSRELNK
WIDDKIANCETPCMDFRKGDHLRLLFSLLKIACQYYGKLRSPFGTDLALKETDSPESAVA
KLFYSAKRSNEYGALMCCLHNLPSEAQSQATALEVQKLLVSGRKKEALQCAQEGQLWGPA
LVIASQLGDQFYGDAVKHMALNQLVAGSPLRTLCLLIARQPADVFSNATTDSNLPMNISQ
QHTQIGANYMLDGWEENLAILTANRTTDDELVIIHLGDCLWKERGQNTAAHICYLVAEAN
FEQYSESARLCLLGADHWKFPRTYASPEAIQRTELYEYSRVLGNSQFLLLPFQPYKLIYA
HMLAEVGKVGDALKYCQAILKSLKYGRAPELDTWRQLVSSLEERIRAHQQGGYNTNLAPA
KLMGKLFTLFDNTAHRVVGGLPPPVPATSQGHAHQPGGPSVSNNQSTMGVSSLMPSASME
PISEWSAESNQLNIPNRSISEPDFGRSPGKVDASKKVDSSKTQEKASTSRFGNFGSQIFQ
KTLGFVKRSQSDRQAKLGEKNKFYYDEKLKRWVEEGAEPPAEEAALPPPPPTAAFPNRVQ
DYNINDALTTKSFDAVAGPQIKSPVPPEQSSGIPPIPPSSNQFSARGRTGVRSRYVDTFN
KGGGTPGSLFQSPSLPSAKPGVGPNPKMFIPTAVTSYEKTVQTPGESEQEPLVTINNPPK
SFQDVLPTPQTSTSYSMTTMQRFPSMDNIVQKRAGEMANGSSFVPPESRRVASWSGSLNH
ASNPSMRNEIKPLGEALGRSPLSHMHSGPPSLQSSRSGGSFGDDLHEVEL
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacttcgtttgagttggaggatcagacagacgaggatttctttgacagattg
gttaatgacgacattgattttactggaaatgtgcctagttctgtacaaaacagtgagcct
gacgaggtcaaagctttttcaaaattgagtatttcagaagccggttctctaggagtagac
atcagcggcaatggtggttttggggttaatggtgaattgggtcatgaagatagggttgtg
ttggaatcgttggatccacttcaggaccctgtagaagttgttaaagaaagcaagtcaccg
acacctgattctaaaaatgagttcattgcattgaatgatatagccgataatggaaatgag
gctagggcattggaggataaagcagatgatagaaatgaggctagtgcattggatgataaa
gccggtgatggaaatgaggctaaggcactggagcataaaggggaggaaggtgcggtagat
ggggcagggagtactagtattgtatcggcggaaactggtgtgaaagtagttcaatggagt
tcgtttaactcagatttgaaaccttctgctgggaactcggattttttcagtgaatttgga
gattactcggaagacccatttgcaaatttgggtaatacagaaaaatcttgggctgagtct
atggtcactaatggtgttttggagaactcagttgctgatttaggtgcttctagttacggg
cagaatcaaggtggtcagccttgtggggctactgaggaacaagatttagatggggaggac
ttgaatggtagtcagaattgggaaaatctttacccgggatggaggtttgatccaaatact
gggcaatggtatcagttggagggttatgatgtgagtgccaatacaaatacagatgtgaac
attaatgcaaatactcaagagagttttaatgtgaattctcagtctgtagataatgtggtt
ttttcagaccagaaagaagatgcttattatttccagcaaccagcgcagtctgtttctcag
agtgtggcccagggaagtgaaactagcactggttctaactggaatgagcattcttgcggg
aacacagattaccctgcacatatggtttttgatccccagtaccccgggtggtactatgat
acaattgctcaagaatggaagcagttggagtcttctgctccagcttctgatcagtcaaca
agcgtggagcataatcagcaatatcacaataccaatgttgagaatcatgggtcacagagt
ctgctcaatgaacaaaatgttgcaaactggggtggatctgtgagcacctatgatcagcaa
agtgcgagtatgtggcatactcagaatgttgccaagagcgacactgttagttttcctgag
aaacagcagtatgcaacccagtatttttcagccgagcatgtagctaattctgtgaatcaa
caaacaggattcaatccttctggatcaattgctcttaatgaagaggtaagtcatggctat
ggtatcagtggtggggttggtgggtttgaaagctttcatcctgcaggaaacttttctcag
catcacaatcaagccaaggagccaaaccaagtgatgagtttctcaccagctaactttgat
tgtcagaagccagtacatttttcacagcagccagtccagagtggaagtcagttttctcat
gaggccagaatggggaggtcatctgcaggacgacctccacatgccctagttacttttgga
tttggtgggaaacttatagtcatgaaagataatagttattctcctgcaaacatgacatat
caaagccaggactctgtaggaggtgtgattaatgttctcaatctgatggaagttgttgta
gacaaaactgatgctgctagctttggaactggttgtcatgattatttccatgcattgtgc
caacaatcttttcctggccctttggttgggggaaatgctggaagtagggaattaaacaaa
tggatagatgacaagattgcaaactgcgaaactccttgcatggatttcagaaagggggac
catttgaggttgcttttctctttactaaaaatagcatgccaatattatggaaaacttcga
tctccctttggcactgacctggcattgaaggaaactgatagtccagagtcagctgttgct
aagcttttttactctgctaagagaagtaacgagtatggtgctcttatgtgctgcttacat
aacttgccttctgaagcacagagtcaagctactgctcttgaggtacagaagcttcttgtc
tctggtaggaagaaagaggctttacaatgcgcacaggaaggtcaattgtggggtccagca
ctggtcattgcatcgcagcttggtgatcagttttatggtgatgctgtgaagcatatggct
ctaaaccagttagtagcaggatcaccattgaggacgttgtgcttgttaattgccaggcag
cctgcagacgtgttttccaatgccactacagatagcaatctacctatgaatatatcacaa
caacatacacagattggggccaattacatgttagatggatgggaagagaatttagcaatc
ttaactgcaaacagaacaacagatgatgagcttgttatcatccatcttggagattgccta
tggaaggaaaggggccagaacactgctgcacacatatgttatttggttgcagaagcgaac
tttgagcaatattcagagagtgcaagactgtgtcttcttggtgcggatcattggaaattt
ccacgaacatatgccagtcctgaggctatccagaggacagaattgtacgaatactcaagg
gttcttggaaattctcagtttctcctacttccttttcagccatataagcttatttatgcc
cacatgctggctgaagttggaaaagttggagatgctctgaaatactgtcaagcaatttta
aagtctttaaaatatggtcgagcacctgaattggacacatggagacagttagtgtcatct
ctggaagagcggataagagcccaccaacagggtggttacaatacaaatttggccccagcc
aaactgatgggaaaattgtttacattatttgataatactgctcatcgtgtggtcggaggc
ctgcctccacctgtacctgcaacatcacaaggccatgctcatcaaccaggaggcccaagc
gtatccaacaatcaatcaacaatgggtgtgtcttcattaatgccttcagcatcaatggag
ccaataagtgaatggagtgctgagagcaatcaactgaatatccccaatagaagcatttcg
gagccagattttgggagaagcccgggaaaggttgatgcatccaagaaagtggactcttct
aaaacacaagaaaaggcatcaacatctcgttttggtaattttggctcacagatattccaa
aagactctgggatttgtcaaaagatcccagtcagatcggcaggctaaattgggtgaaaag
aataaattctactatgatgagaaacttaaacgatgggttgaagaaggtgctgaacctcca
gccgaggaagcagccttaccacctccaccaccaactgcagccttcccgaatagagttcaa
gattacaacataaatgacgcactgaccaccaaaagtttcgatgcagttgctgggccacaa
atcaaaagcccggtgccccctgagcagagttcaggaataccacccatcccacccagttca
aaccaattctctgcacgtggacgtacaggtgttcgctcaaggtatgttgatacattcaac
aaaggtggtgggaccccaggaagcttatttcagtcaccatctcttccatctgctaaacct
ggggttggtcccaatcccaagatgttcatccccactgctgtaacttcttatgagaagaca
gttcaaacacctggagagagcgagcaagagccgttggtgaccatcaacaatcccccaaaa
tcatttcaggatgtattgcccactccacaaacatcaacatcatattcaatgacaactatg
caacggtttcctagcatggacaacattgtacaaaagagagcaggagaaatggcaaatggc
agtagctttgttccccctgaatcgcgccgtgtagcatcatggagtggaagccttaatcat
gctagcaatccttctatgaggaatgaaataaaacctctaggagaagcacttggtaggtct
ccattgtcgcatatgcatagtggtccgccatcattgcagtcttcaagaagtggtggtagt
ttcggagacgaccttcatgaagttgaactttga
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