Prunus dulcis (almond): 117617761
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Entry
117617761 CDS
T07328
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117617761
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pdul04812
]
117617761
Enzymes [BR:
pdul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
117617761
Membrane trafficking [BR:
pdul04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117617761
Cytoskeleton proteins [BR:
pdul04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
117617761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_5
AAA_16
NPHP3_N
AAA_22
AAA_14
TIP49
Mg_chelatase
AAA_2
DUF815
MIT
RNA_helicase
IstB_IS21
nSTAND3
AAA_25
MCM
AAA_33
AAA_24
TetR_C_30
Motif
Other DBs
NCBI-GeneID:
117617761
NCBI-ProteinID:
XP_034203176
LinkDB
All DBs
Position
2:complement(16119720..16125672)
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AA seq
522 aa
AA seq
DB search
MRWSLKKLSSIKNDFPGKFTQFPGNDMSFLKGIIDSFGSVFSAASASYESHPNSDSPPNS
STMEGIAGPGASVSNERVAYKLRGYFDLAKDEIAKAVRAEEWGLVDDAIAHYNNAQRVLV
EATSTPVPSYISPSEREKVKSYRQKISKWQGEVSERLQALSRRAGGTSVSKSTLAHAQTA
VVKPTTSNARKHVLPKSPRPTTNRPEMRNQIQTNNIVSSKPVQETGGGYDAKLVEMINSA
IVDRSPSVKWEDVAGLEKVKKTLMEMVILPTKRRDLFTGLRRPARGLLLFGPPGNGKTML
AKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFLVAISRQPSVIFMDEIDSIMSTRL
ANENDASRRLKSEFLIQFDGVTSNPNDLVIVIGATNKPQELDDAVLRRLVKRVYIPLPDL
TARRLLLRHKLKGQAFSLPSGDLERLARETEGYSGSDLQALCEEAAMMPIRELGENILTI
KANQVRPLRYEDFQKAMTVIRPSLSKSKWEELERWNEDFGSN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggagtctgaaaaagctaagctccataaagaatgactttcccggaaagtttact
caatttcccggaaatgacatgagtttcctcaaagggatcatcgattcttttggttcggtc
ttctccgccgcttccgcctcatacgagtctcacccaaactctgattctcctccaaattcg
tcaaccatggaaggcatagctggacctggagcttcggtctccaacgagcgtgttgcgtac
aagcttagggggtacttcgatttagcaaaggatgagatcgccaaggctgttagggctgaa
gagtggggcttagtcgacgacgccattgctcactataacaacgcccagagagttctcgtt
gaagcaacgtccactcccgtgccttcctatatcagccccagtgagcgagagaaggtcaaa
tcttatcgccaaaaaatatcaaaatggcagggtgaagtttctgaaaggttacaggccttg
agtaggcgagcaggtggcacgtctgttagcaaaagcaccttagcccatgcgcagactgct
gtagttaaaccaacgacatcaaatgccagaaagcatgtgttacccaagtctcctcgtccc
actacaaacagacccgaaatgaggaatcagattcagaccaataatattgtaagctcaaaa
cctgtgcaagagactggtggtggttatgatgcaaaattggtggaaatgataaatagtgct
atagtggatagaagcccttcagttaagtgggaagatgtagccggtcttgagaaggttaag
aaaactttgatggagatggttattttaccaactaagagaagagacttgttcactggtctt
cgaaggccagctagaggtctgcttttgttcggtccacctgggaatgggaagaccatgctt
gctaaggcagttgcatcagagtctgaggcaacattttttaatgtatctgcttcttcactg
acatcaaaatgggtaggagaggctgaaaagcttgtgcgaacccttttcttggttgctata
tccagacagccatcagtaattttcatggatgaaattgatagtatcatgtcaacaaggctt
gcaaatgaaaatgatgcaagcagaaggttgaagtcagagtttttaatacagtttgatggg
gtgacctctaatcctaatgatctggtaattgtgattggtgctactaataagccacaagaa
ctggatgacgcggttcttagaagactggtgaagagagtgtacatacctttaccagattta
acagcaaggagactgcttctaagacacaaactcaagggccaagcgttttccttaccaagt
ggagatcttgaaagacttgcaagagagacagaaggatattcaggaagtgatctgcaagca
ttgtgtgaagaagctgcaatgatgcctattagggaactgggtgaaaacattctcaccatc
aaggcaaatcaggtaagaccacttagatacgaagattttcagaaggcaatgactgtaatc
agaccaagcttaagcaaaagcaagtgggaagagcttgaacggtggaacgaggacttcggc
tctaattga
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