Prunus dulcis (almond): 117618140
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Entry
117618140 CDS
T07328
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117618140
03009 Ribosome biogenesis [BR:
pdul03009
]
117618140
Spliceosome [BR:
pdul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117618140
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
90S particles
RNase
117618140
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
peroxidase
DBR1
Metallophos
Metallophos_2
PDDEXK_10
Motif
Other DBs
NCBI-GeneID:
117618140
NCBI-ProteinID:
XP_034203649
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All DBs
Position
1:31769791..31774639
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AA seq
730 aa
AA seq
DB search
MKIAVEGCMHGDLDNVYRTLQHYEKLHSTKIDLLLCCGDFQAVRNEKDLESLNVPRKYRD
MKTFWKYYSGEEVAPFPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI
GGLSGIYNRHNYCKGHYERPPYNESTIRSIYHVREYDVHKLMQVEEPIDIFLSHDWPVGI
TDCGDWKKLVRDKPFFEKEVQERNLGSKPAAQLLEKLKPPYWFSAHLHCKFAALVQHEED
ISVTNFLALDKCQPGRKFLQVIEIESEPGPYEIQYDEEWLEITRRFNSNFPLTNRSANFW
NVHLDKQDCRQWVRRNLQARGARPFEFTQTAPPYNPSNFVPSGTFPEYTRNPQTESLLQF
LELPYLLDNTSESSQVPRSPLPLIRTGSLEDNSEDLAEDATNMEKRPTAFFYTHGVFFVW
LCLAASASCDELTLSFYSASCPSAELMVRNTVRSASDMDPTIPGKLLRLLFHDCFVEGCD
ASVLLQGTGTERSDPANTSLGGFSVIDSAKRLLEIFCPGTVSCADIVALAARDAVEISGG
PVVQIPTGRRDGKVSAASNVRPNIVDTSFTMNEMIKLFSSKGLSLDDLVTLSGAHTIGSA
HCGAFSDRFQQDSKGKLKLIDTSLDNAYAEELMRQCPAGANPSTTVKIDPNTSFAFDNHY
YQNLLAHRGLFQSDSVLLSDDRTRKLVESFAQDQVIFLESWAQSFLKLASIGVKTGEEGE
IRASCPTTNA
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgcagtagaaggttgtatgcatggcgacctcgacaatgtctacagaaccctc
caacactacgaaaaacttcacagcaccaaaatcgaccttctcctctgctgcggcgacttt
caggctgtgaggaatgagaaggatttagagagtttaaatgtgcctcgaaaatatcgggac
atgaagaccttctggaaatactattccggcgaggaagttgctccgttccccacaatattc
atcggtggaaatcacgaagcttctaattatttgtgggaactgtattatggagggtgggca
gcacctaatatatacttcttggggtttgctggggtagtcaagtttggaaacattcgaatt
ggtgggctgtctggaatttacaaccggcacaattattgcaaagggcactatgagaggcct
ccttataatgagagtactatcaggtccatatatcatgttcgtgagtatgatgtccacaaa
ctcatgcaagttgaggaaccaattgatatttttctttcacatgattggcctgttggaatc
actgattgtggggactggaagaaacttgttcgggacaaacctttttttgagaaggaggtt
caggaaagaaatcttgggagtaaaccagctgctcaattgctagaaaaactgaaaccacct
tattggttttcagctcatctacactgcaaatttgctgctcttgttcagcacgaggaagat
atttcagtgacaaactttcttgcccttgacaagtgccaaccaggacgcaaatttctgcag
gttattgaaattgaatctgagccaggcccttatgaaatccagtatgatgaagaatggcta
gaaataactcggcgatttaactctaatttccctctcacaaatagaagtgcaaatttttgg
aatgtacatcttgacaagcaagattgtcgtcaatgggtcaggagaaatttacaagcaaga
ggggctagaccttttgaattcacccagacagctccaccttacaatccctctaactttgtc
ccgagcggtacctttcctgaatacactcggaatcctcagacagaatctcttttgcagttt
ctggaacttccttaccttcttgataacacgtcagaatcatcacaagtacccaggagtcct
cttccattgatccgtacaggttctcttgaagataacagtgaagaccttgctgaagatgcg
accaatatggagaaaagaccaacagccttcttttacacacatggtgtcttctttgtgtgg
ttatgtttagctgcttctgcttcttgtgatgagctcacattgagtttctactcagcttca
tgcccttctgctgagctcatggtcagaaacacagtcagatcagcttctgacatggaccct
accatccctgggaagcttcttcgcttgctcttccatgattgctttgtggagggttgtgat
gcatctgtgcttctacaaggaactgggactgagagaagtgatccagcaaacacatctctg
ggaggcttttcagtgattgattcagcaaaaagactgcttgaaattttctgtccaggaact
gtttcttgtgctgacattgttgctttggctgctagagatgctgttgaaatttctggggga
cctgtagttcagattccaactggtaggagagatggaaaggtttctgcagcttcaaatgtc
aggcctaatattgtagacacaagttttacaatgaatgagatgattaagctcttctcatct
aaagggttgtctttggatgaccttgtcaccctatcaggagctcacactattggatcagct
cattgtggtgcattcagtgacaggttccaacaagattccaaaggcaaactcaaactcatt
gacacatccttagacaacgcttatgcagaggagctcatgagacagtgccctgcgggcgca
aatccatctacaacagtcaaaattgatcctaacacttcgtttgcgttcgataatcattac
taccaaaatctcttagcccacagagggctatttcaatcggattccgtcctgttaagtgat
gacagaacaaggaagctagtggagagttttgcacaggaccaagttattttcttggagagt
tgggctcagtcattcttgaagcttgctagcattggcgtcaagactggtgaagaaggcgaa
attcgagcctcttgtccaacaactaatgcatga
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