KEGG   Prunus dulcis (almond): 117618149
Entry
117618149         CDS       T07328                                 
Name
(RefSeq) replication factor C subunit 3-like
  KO
K10756  replication factor C subunit 3/5
Organism
pdul  Prunus dulcis (almond)
Pathway
pdul03030  DNA replication
pdul03410  Base excision repair
pdul03420  Nucleotide excision repair
pdul03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pdul00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117618149
   03410 Base excision repair
    117618149
   03420 Nucleotide excision repair
    117618149
   03430 Mismatch repair
    117618149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pdul03032]
    117618149
   03036 Chromosome and associated proteins [BR:pdul03036]
    117618149
   03400 DNA repair and recombination proteins [BR:pdul03400]
    117618149
DNA replication proteins [BR:pdul03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    117618149
  DNA Replication Termination Factors
   ELG1-RFC complex
    117618149
Chromosome and associated proteins [BR:pdul03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    117618149
DNA repair and recombination proteins [BR:pdul03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     117618149
  Check point factors
   HRAD17(Rad24)-RFC complex
    117618149
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid COMPASS-Shg1 RuvB_N Rad17 RsgA_GTPase AAA_11
Other DBs
NCBI-GeneID: 117618149
NCBI-ProteinID: XP_034203653
LinkDB
Position
2:complement(12682721..12691087)
AA seq 632 aa
MSSPSIISRSSSFPRLKKTWPSQYTLPEDLPPANRSACSAPTLKIASVKLSWGRKIRRLI
GRRGNSELTEQSLEVYNKTLVAENVVNHHKRVGQISLDDYYKNEIDDERSSKYSPYYIRG
LTYPSIIVPKHPIANTPGHESNNSAVTWTSISTFFSGFKVREWSSCLGSRTKEYKKNLQP
EMYTAIKPSTSSTVNASPKNSETSLVEESIERKEVMKSSNEYNKEKPLRERVRAAARPKN
EIKVMNEAQKEYAWADKYQPLCLEDFICNKDKATQLQALARGGACGHFIFEGPPGVGKRT
MIWAMLREAFGRDTIHAREEFKAFNLKGEMVGSIEVHVKQSPQHVEVNLSELKGYEKHVI
VELMRETQDKTTNKALPCGLDNCRAIILYEADKLSTDALLYIKWLLERYKGCNKVFFCCS
DVSKLQAIKSLCTVVELLPPSKTETVAVLKFIAKQEGIDLPHELAERFAENSKNNFYLAI
RSFEATWKKCYPFKENQVILTGWEDNIADIAKNMIEEQSPKQLYIIRGKLQNLIVHGVSP
EFIFQSLVAELKKYLDDSLQDRIESMYDEYNRNDENMFESDKYDHEEMSKRLNDHSRKSI
KQFLRIEEFIAKFMSCYKGCTNTKSLPHDGPT
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgtcaagcccttcaataatctcccgctcttcctccttcccacgcctcaagaaaacctgg
ccttctcagtacactctcccagaagacctcccccctgcaaaccggtctgcatgctcagct
cccacgttgaaaatcgcgagtgtcaagctctcttggggcaggaaaataagaagacttatt
gggaggagggggaattcagaattgacagagcaaagcctcgaggtttacaataagacactt
gttgcggaaaatgtggtcaaccatcacaagagggtagggcaaattagtctggacgactat
tacaagaatgagattgatgatgaaagaagctccaagtatagtccctattacatcagggga
ctgacgtatccgagcatcattgtccctaagcatccaattgctaatactcccgggcacgaa
agcaacaactctgctgttacttggacctcaatctccaccttcttttcgggattcaaagtg
cgagagtggagctcttgccttggttctagaaccaaggagtacaaaaagaatcttcagcct
gaaatgtacaccgcgatcaaaccctccacgagttcaacagttaatgcttcaccgaagaat
tcagagacgtctttggtggaggagagcatagagagaaaagaggtcatgaagagtagcaat
gaatataacaaggagaagccattgagggagagagttagagcagcagctagaccaaaaaac
gaaataaaggtgatgaatgaagctcagaaggagtatgcgtgggcagacaaataccaacct
ctgtgcttagaagatttcatatgcaataaagacaaagcaactcagctgcaggctttggcc
agaggaggagcatgtgggcatttcatctttgaaggaccaccgggcgttgggaagagaaca
atgatctgggctatgcttcgcgaggcgtttggtcgtgacacaatacatgccagggaggaa
ttcaaggcatttaacttgaagggtgaaatggttggtagtatagaagtacatgtaaagcaa
tcccctcaacatgtagaagtgaatctttctgaactgaagggctatgagaagcatgtgatt
gttgaactcatgagggaaacacaggacaagacgaccaacaaagctttgccctgcggcctc
gacaactgtcgagcaataatcttatatgaggcagacaagctatctacagatgccctactt
tatataaagtggctattagaaaggtataaagggtgtaataaggtcttcttctgctgctct
gatgtctcaaagcttcaggcaatcaaatcactttgcactgtcgttgagcttttaccacct
tcaaagactgagactgttgcagttttaaagttcatagctaagcaagaaggcatagatttg
ccacatgaattggctgaaaggtttgctgaaaattctaagaacaatttctatctagccatt
cgatcattcgaggctacttggaagaaatgctatcctttcaaagaaaatcaagtcattttg
acaggttgggaagataacattgcagatattgccaagaatatgatcgaagagcaaagccca
aaacagctatatataatccgtggaaagcttcaaaatcttatagtgcatggcgtaagcccc
gaattcattttccaatccctggttgcagagctgaagaagtatttggatgatagtttgcag
gatcgaattgagagcatgtacgatgaatacaacaggaatgacgaaaatatgtttgagagt
gacaaatatgatcatgaggaaatgagtaaaaggcttaacgatcattccagaaagtctatt
aagcagttcttgaggattgaagagtttatagctaaattcatgagctgctataagggttgc
acaaatacgaaatctttgccccatgacggtccaacataa

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