Prunus dulcis (almond): 117618149
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Entry
117618149 CDS
T07328
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03030
DNA replication
pdul03410
Base excision repair
pdul03420
Nucleotide excision repair
pdul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117618149
03410 Base excision repair
117618149
03420 Nucleotide excision repair
117618149
03430 Mismatch repair
117618149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdul03032
]
117618149
03036 Chromosome and associated proteins [BR:
pdul03036
]
117618149
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117618149
DNA replication proteins [BR:
pdul03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
117618149
DNA Replication Termination Factors
ELG1-RFC complex
117618149
Chromosome and associated proteins [BR:
pdul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
117618149
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
117618149
Check point factors
HRAD17(Rad24)-RFC complex
117618149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
COMPASS-Shg1
RuvB_N
Rad17
RsgA_GTPase
AAA_11
Motif
Other DBs
NCBI-GeneID:
117618149
NCBI-ProteinID:
XP_034203653
LinkDB
All DBs
Position
2:complement(12682721..12691087)
Genome browser
AA seq
632 aa
AA seq
DB search
MSSPSIISRSSSFPRLKKTWPSQYTLPEDLPPANRSACSAPTLKIASVKLSWGRKIRRLI
GRRGNSELTEQSLEVYNKTLVAENVVNHHKRVGQISLDDYYKNEIDDERSSKYSPYYIRG
LTYPSIIVPKHPIANTPGHESNNSAVTWTSISTFFSGFKVREWSSCLGSRTKEYKKNLQP
EMYTAIKPSTSSTVNASPKNSETSLVEESIERKEVMKSSNEYNKEKPLRERVRAAARPKN
EIKVMNEAQKEYAWADKYQPLCLEDFICNKDKATQLQALARGGACGHFIFEGPPGVGKRT
MIWAMLREAFGRDTIHAREEFKAFNLKGEMVGSIEVHVKQSPQHVEVNLSELKGYEKHVI
VELMRETQDKTTNKALPCGLDNCRAIILYEADKLSTDALLYIKWLLERYKGCNKVFFCCS
DVSKLQAIKSLCTVVELLPPSKTETVAVLKFIAKQEGIDLPHELAERFAENSKNNFYLAI
RSFEATWKKCYPFKENQVILTGWEDNIADIAKNMIEEQSPKQLYIIRGKLQNLIVHGVSP
EFIFQSLVAELKKYLDDSLQDRIESMYDEYNRNDENMFESDKYDHEEMSKRLNDHSRKSI
KQFLRIEEFIAKFMSCYKGCTNTKSLPHDGPT
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcccttcaataatctcccgctcttcctccttcccacgcctcaagaaaacctgg
ccttctcagtacactctcccagaagacctcccccctgcaaaccggtctgcatgctcagct
cccacgttgaaaatcgcgagtgtcaagctctcttggggcaggaaaataagaagacttatt
gggaggagggggaattcagaattgacagagcaaagcctcgaggtttacaataagacactt
gttgcggaaaatgtggtcaaccatcacaagagggtagggcaaattagtctggacgactat
tacaagaatgagattgatgatgaaagaagctccaagtatagtccctattacatcagggga
ctgacgtatccgagcatcattgtccctaagcatccaattgctaatactcccgggcacgaa
agcaacaactctgctgttacttggacctcaatctccaccttcttttcgggattcaaagtg
cgagagtggagctcttgccttggttctagaaccaaggagtacaaaaagaatcttcagcct
gaaatgtacaccgcgatcaaaccctccacgagttcaacagttaatgcttcaccgaagaat
tcagagacgtctttggtggaggagagcatagagagaaaagaggtcatgaagagtagcaat
gaatataacaaggagaagccattgagggagagagttagagcagcagctagaccaaaaaac
gaaataaaggtgatgaatgaagctcagaaggagtatgcgtgggcagacaaataccaacct
ctgtgcttagaagatttcatatgcaataaagacaaagcaactcagctgcaggctttggcc
agaggaggagcatgtgggcatttcatctttgaaggaccaccgggcgttgggaagagaaca
atgatctgggctatgcttcgcgaggcgtttggtcgtgacacaatacatgccagggaggaa
ttcaaggcatttaacttgaagggtgaaatggttggtagtatagaagtacatgtaaagcaa
tcccctcaacatgtagaagtgaatctttctgaactgaagggctatgagaagcatgtgatt
gttgaactcatgagggaaacacaggacaagacgaccaacaaagctttgccctgcggcctc
gacaactgtcgagcaataatcttatatgaggcagacaagctatctacagatgccctactt
tatataaagtggctattagaaaggtataaagggtgtaataaggtcttcttctgctgctct
gatgtctcaaagcttcaggcaatcaaatcactttgcactgtcgttgagcttttaccacct
tcaaagactgagactgttgcagttttaaagttcatagctaagcaagaaggcatagatttg
ccacatgaattggctgaaaggtttgctgaaaattctaagaacaatttctatctagccatt
cgatcattcgaggctacttggaagaaatgctatcctttcaaagaaaatcaagtcattttg
acaggttgggaagataacattgcagatattgccaagaatatgatcgaagagcaaagccca
aaacagctatatataatccgtggaaagcttcaaaatcttatagtgcatggcgtaagcccc
gaattcattttccaatccctggttgcagagctgaagaagtatttggatgatagtttgcag
gatcgaattgagagcatgtacgatgaatacaacaggaatgacgaaaatatgtttgagagt
gacaaatatgatcatgaggaaatgagtaaaaggcttaacgatcattccagaaagtctatt
aagcagttcttgaggattgaagagtttatagctaaattcatgagctgctataagggttgc
acaaatacgaaatctttgccccatgacggtccaacataa
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