Prunus dulcis (almond): 117618185
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Entry
117618185 CDS
T07328
Name
(RefSeq) serine/arginine-rich splicing factor RS41 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117618185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117618185
Spliceosome [BR:
pdul03041
]
Common components
Common spliceosomal components
SR proteins
117618185
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RNA_bind
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
117618185
NCBI-ProteinID:
XP_034203680
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All DBs
Position
2:24215564..24219911
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AA seq
403 aa
AA seq
DB search
MRPIFCGNFEYDARQNELERLFGRYGKVDRVDMKSGFAFIYMEDERDAEYAIRGLDRKEF
GRKGRRLRVEWTKVANHERGTRRPGASRRSSTNTRPSKTLFVINFDPYHTRTKDLERHFD
PYGKIVSVRIRRNFAFVQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRDGFSP
DRRSRDRSLDRGRDRRRSPSPYKRERGSPDYGRGPSPGPYRRERGSPDYGRGPSPYRRER
VSPDYGRGRSPSPYRRERSDHGRVSSRSPRKERVSADRIRDRSRSPYGRERPGADNGHAP
IRSPYKRDRESPENGAIESPYKRDRASPENGAIQSPYKRDRSSPENGRGPSSSPYERERV
SPEHGHGPSPNSVPEARGDSPNYGGPESPMQERYSSRSPQAEE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccattttttgtgggaattttgaatatgatgctcgacaaaatgaattggagcgg
cttttcggtagatatgggaaagttgacagagtggatatgaagtctgggtttgcctttatc
tacatggaagatgagagagatgctgagtatgctattcggggacttgatcggaaagaattt
ggtagaaaaggacgcaggcttcgtgttgaatggacgaaggtagcaaatcatgaacgtggt
actagaagaccgggtgcttcaagaagatcttcgactaatacaagaccttcaaagaccttg
tttgttattaattttgatccgtatcacactaggaccaaggatttggagaggcactttgat
ccatatgggaaaattgtgagtgttaggatcagaagaaatttcgcatttgttcagtatgag
tcacaagaagatgctactagggcattggaagctacgaacatgagcaagctgatggatcga
gttatatcagtggagtatgcagttcgtgatgatgatgaaagaagagacggctttagtcct
gataggagaagtcgtgataggtcactagacagaggccgtgatagaagaagatccccaagt
ccctacaaaagagagaggggtagccctgattatggccgtggccctagccctggtccctac
cgcagagagaggggtagccctgattatggccgtggcccaagtccttatcgaagggagaga
gtaagtccagactatggccgaggccgcagcccaagtccctatcgaagggagagatctgat
catggccgggtctctagtcgcagtccccggaaagagagggtgagtgcagaccgtatccgt
gatcgtagccgtagtccttatggaagagagaggcctggggctgacaatggccatgctccc
atccgtagtccatataagagagacagggagagtcctgaaaatggtgccattgagagtcca
tataagagagatagggccagtcctgaaaatggcgccatccagagtccatataagagagat
aggagtagtcctgaaaatggtcggggccccagcagcagtccttatgaaagagagagggtc
agccctgaacatggtcacggtccaagccccaattctgtgcctgaagctaggggggacagc
cctaactatggtgggcctgaaagccccatgcaggagagatatagcagccgttcaccacaa
gctgaggaatga
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