Prunus dulcis (almond): 117618510
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Entry
117618510 CDS
T07328
Name
(RefSeq) uncharacterized protein At3g06530
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117618510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdul03009
]
117618510
Ribosome biogenesis [BR:
pdul03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117618510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
Motif
Other DBs
NCBI-GeneID:
117618510
NCBI-ProteinID:
XP_034203969
LinkDB
All DBs
Position
2:23346873..23361724
Genome browser
AA seq
2151 aa
AA seq
DB search
MATSIASQLEAIKSVIQADTEPSVKRPFTRPSILFDAKEAADIDIDTIFSIALQGLDVLV
ITDERFRIYKNDLFSQKSRELDRELMGIEENNGINVSISSYLRLLSGHFELPSSIKTLEY
LIRRYKIHVYNFEDLILCALPYHDTHTFVRIVQLISLRNSKWRFMDGVKVSGAPPPRKVI
VQQCIRDKGVLEILCNYASPLKKYRPSRPVIRFCTAVVIEVLGSSTSVDSDVVQRILSLV
VSGLEAGTKGDSENKAGAMMIVGLLASKVTLSPKLVKSLMRSIAEIAREEAKESADLQLF
RLSLMTLINLVQLQAVDIFPIKTLEILMDIRDFAAILLGLFNEFNIDRFVWVLLDSLIDY
SSSNESCQLSLISILETIPSKNFVQHAVSKVLSSCLQSSQKIKNSTSSLSGSWAKKILVV
LNEKYQSELQGAVHKFLDEKNVQSKKGGSVHEILGQMLDGNLDMSLAFSESKIWFGLHHP
KADVRRRTLSALGTSGVLEAKATNPQSLVSIEDVILRQLHDDDLTVVRAALSLDRLSTII
SSADLFEALGNVLKRCIGILMSSSLENSSLACDVSVLCLKNASSGIDDNIERCNILASMI
FPLLLVLPKTQRLNLKALELAKEVKWPLFENLAGASNTALTSQPGSLSSINMDTIASLAG
RFSLHPEEFMPWLIKSSNDFELSKTQFFLVMMQMLLIQKNKSAGFLALFEVGFPALKAEW
EAFESTGDSSIEEFDKDVLNWDCRIFLDKLDSNLKALNANILICLFWRLMEAFLSAMPAD
ISMDNDKKWASWLRDLFVFFSISKFKKVFKEHRHYLVTKCKISAVRFLPRFFTEEDVPPA
VQVESLNCFAYLALQPEVRLPIQLLAEFPSFLVPLASYNQDIRHAAMNCIEGLHTLWAHV
DSSSKKNGNHATWIHLLDKLLDLMVQQKRLILSDRNFLPSLLASLLSPSCQGFIAPKNVE
LRVDQSTRKKILAFILNSALKLPDYAKLVILSLLRGMGNAIIHDREMKSFLSQLLGRRSQ
NYCELHVSSQNLSKIEVQILCLLLESCAMPSSPDEHVLEDHLLEALKLDGLAPEDPAVIQ
PCVTVLQKLNSQIYSGLKTEIQELLFQELVSLFRNANGDIQKETRAALLRLNITCSTIVQ
TLDCMVNNRSCVTDSGYGKKKMKLTGHLKSNPSCDLIFKGENALSLLSSLMDVLLFKKDI
ENRDTLLGPLFKLLYRTFSNEWVHGVLVQDEKQIQVSSRNSDSMSSAISCIQQTLLIILE
DISSSLTNSVPLADNIINEIDVKMLVECAHSVKDGVTRNHVFSLISSITKIIPEKVLGHI
LDIFTLIGESAVTQIDSHSQHVFEDLISTVVPCWLSGTGNNDKLLQIFINVLPEVAEHRR
LSIVVYLLRTLGESNSLASLLVLLFRSLVSRKGLSCFDNMHASDSSTASLQRQWEYALGI
HVYEQYSCMIWLPSLVMMLKQIGMGIQSQELFIELLITMRFTLHKLQDPEFAFKLVSGED
SEKVQATLEELMEQVVSLQQSVDARRKKKGIHVSIRKELKECMHGVLRTITIAMMPPTHF
KSITKLLGHRDRNVAKKALGLLCETVRDHDRVRTKHKYNSSSSHQWQHLDENSLESFRYM
CLKIVDLVDDSSDDSEASLKVAAALALEVLAHKFPTNYSIFNECLPLVTKNISMHDLAVS
SSCLQATGALINVLGPRALSELPHIMENLIRISHEAFLSSDIKTTSGVDDGLPVVLQIPK
ESLILSILVTLEAVVVKLGGFLNPYLEEITRIMVLHLDYALGSDQKLKIKADSVRRLITE
NIPVRLALPPMLKIFSSTVESGDSSLTVYFGMLENMIDRLDRSSIGGYHAKIFDLCLYAL
DLRRQHPASVQNIDDVEKNVYNAVVALTMKLTESMFKPLFIRSIDWAESDVEDIACAGNI
PRAISFYGLVNKLVENHRSLFVPYFKYLLEGCVRFLTVAGDAKASGSTRKKKAKIQEGKD
NSVLLGNWHLRALILSSLHKCFLYDTGSLKFLDSSNFQVLLKPIVSQLVVDPPLSLEEHP
YIPSVEEVDNLLVACIGQMAVTGGSDLLWKPLNYEVLMQTRSDKVRSRILGLRVVKYLVE
HLREEYLVFLAETIPFLGELLEDVELPVKSLAQSILKDMETMSGESLSQYL
NT seq
6456 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcgattgcgtcccagttagaagccataaagtccgtgatacaagccgacaca
gagccgtcggtcaagaggcccttcactcgcccttccattctcttcgacgctaaagaggct
gctgatatcgatatcgataccattttctccattgcactccaaggtctggatgtccttgta
atcactgatgagcgatttagaatctacaagaatgacttgttcagccaaaaaagcagagaa
ttggatagagagttgatgggcatagaggaaaataatggcattaatgtttcgatcagttca
tacttacgattactctcaggacactttgaactcccatcgtcaatcaagacacttgagtac
ttgatacgccgatataagattcatgtgtacaacttcgaggacttaattttgtgtgctttg
ccataccatgacacccacacatttgttcgaatagttcaattaattagcttgagaaatagt
aaatggagatttatggatggcgtaaaagtttctggtgcaccaccacctagaaaggttatt
gtccagcaatgtattcgtgataagggggttttggagattttatgcaactatgcatccccg
ttgaagaagtataggccttcaaggcctgtgataaggttttgcacggcagttgttatcgag
gttttgggttcctccacatctgttgacagtgatgttgtgcagagaatcctatcacttgtt
gtttctggacttgaggctggcacaaaaggagattcagaaaacaaggctggtgccatgatg
attgttggtttgctagcgagtaaagttacattatctcccaaacttgtcaagagtttgatg
aggtcaattgctgaaattgctcgagaggaggcaaaagagtcggctgatcttcagttgttt
cgcttatcgcttatgactttgatcaaccttgttcagctgcaagctgttgatattttcccg
atcaagactttggagattttgatggacattagggattttgctgctatacttttgggactg
tttaacgagttcaatattgatagatttgtatgggtacttttggattctctgattgactac
agttcttctaatgaatcatgccagctttctttgatctcgatattagagacaattccttcc
aagaattttgttcaacatgcagtttctaaggtcctatcatcctgcttgcaaagttcacag
aaaataaaaaattcaacatcatctttatcaggaagttgggcgaagaagatcttagttgtt
ctgaatgagaaatatcaatctgaactacagggagcggttcacaaatttcttgatgaaaag
aatgtacagtctaagaaagggggctcagtacatgaaattttgggtcaaatgttggatggt
aatttggacatgtcactagctttctcagagtcaaaaatttggtttgggttgcaccatccg
aaggctgatgttcgccgtcgcacactgtctgcattaggcacatcgggtgttctggaagcc
aaggccacaaacccacagagtcttgtaagcatcgaagacgtcatactgcgacaacttcat
gatgatgatcttactgttgttcgggcagctttgtccttagacagattgtccactataata
agttctgctgacctttttgaggcactgggtaacgtgcttaaaagatgtattggcattctg
atgtcaagttcattggagaacagcagtctagcatgtgatgtttctgttttgtgcctgaag
aatgctagctctggtatcgatgataacattgaacgttgcaatatacttgcttccatgata
tttccattgctccttgttctacctaagacacagaggttaaatttgaaagcattggaatta
gctaaggaggtaaagtggccactttttgagaatcttgcaggtgcctccaacacagcattg
acatcgcaaccaggaagcctgtcctcaattaacatggacaccattgcaagtttggctggc
aggttctcgttgcaccctgaagaatttatgccttggcttattaagagttctaatgacttt
gagttgtcaaagacacagttctttttggtgatgatgcagatgcttctcattcaaaagaat
aaatctgctggatttttggccctttttgaagttggttttcctgcactgaaggcggaatgg
gaagcatttgagtcaacgggtgatagctctatagaggagttcgataaggacgtgctgaat
tgggattgcagaatattccttgataagctggactccaatttgaaggcattaaatgcaaat
attctaatttgcctattttggaggttaatggaggcatttttatctgcgatgcctgctgat
atctctatggataatgataagaagtgggctagctggcttagggacttgtttgtctttttc
tcaatctctaagtttaagaaagtcttcaaagaacaccgtcattaccttgtcacgaagtgc
aaaatctctgctgttcgcttcctgcccaggtttttcacagaagaagatgttccccctgca
gtccaagttgagagtcttaactgttttgcatatctcgctcttcaaccagaagttcgattg
ccaattcaacttcttgcagaatttccgtcttttcttgttccactggctagttataatcag
gatataagacatgctgccatgaactgtattgaggggttacacacactttgggctcatgtt
gactcttcgagcaagaaaaatggaaaccatgcaacttggattcaccttctcgataagctt
ttggacttgatggttcaacaaaaaaggctcatcttatcagacagaaactttcttccttcc
cttttggcctctttgctcagcccatcctgccagggcttcatagcaccaaagaatgttgag
ctgagggttgatcaatctacaagaaagaagattcttgctttcattttgaattctgccctg
aaactgcctgattatgcaaagcttgtgattctatctttgcttagaggaatgggcaatgcc
atcatacatgatagagagatgaagtcatttttatctcagcttttgggaagacgcagtcaa
aattactgtgaactgcatgtctccagccagaatttgtcaaaaattgaagttcagatacta
tgccttctactggagagttgtgctatgccttcttcaccggatgagcatgttttagaggat
catttattggaggctttgaagttggatggtttggctccagaagaccctgctgttatacag
ccttgtgtaactgttctgcagaagcttaacagtcaaatatacagtgggctgaagacagaa
atacaggagcttctgtttcaggaacttgtttctttatttcggaatgctaatggtgatata
caaaaggagactcgagcggccttgctgcggttaaatattacttgctctactattgttcag
acgcttgattgcatggtcaacaacagaagttgtgtaactgattcagggtatggaaagaag
aaaatgaagttaacagggcatctgaagtcgaatccgtcctgtgatttgatatttaaagga
gagaatgcgctctctctccttagctccctcatggatgtgttgctatttaagaaagacata
gagaacagggatactcttttggggccattatttaagcttctttacagaacattttccaat
gagtgggtacatggtgttcttgtccaggatgaaaagcagattcaagtttcttctagaaat
tctgactccatgtcaagcgcaataagttgcatacaacagacgctgctgataatcctggaa
gatattagttcctctctcacaaattctgttccactggcggataacataataaatgagatt
gatgtcaaaatgttggttgagtgtgcccattcagtgaaggatggagttactcgcaaccat
gttttttcactaatttcctccatcacaaagattattccagaaaaagttttggggcatata
ctggatatttttactcttataggagaatcagcagtcacacagattgacagtcattcacag
catgtgtttgaggatcttatatctacagttgttccatgttggttgtctgggaccggcaac
aatgacaagttgctccagatatttatcaatgtattgcctgaagttgctgaacatagaagg
ttatcaatcgttgtatacctactcaggactttgggggagtcaaatagcttggcttcatta
cttgtgcttctcttccgttcattggtttcacgaaaaggattatcgtgctttgataacatg
catgcttcagatagctccacagcttcattacagagacagtgggagtatgccctggggatc
cacgtatatgagcaatattcatgcatgatatggcttccctctctggtaatgatgcttaaa
caaataggaatgggtattcagtctcaagaactgtttatcgaattgttaattacgatgcga
ttcaccttacacaaattgcaagatccagagtttgcattcaagcttgtatcaggggaagat
tcagaaaaagttcaggctacattggaagaactcatggagcaggttgtctctctccagcaa
tctgtagatgcaagaaggaagaaaaagggtatccatgtctctattaggaaagagttgaag
gagtgcatgcatggtgtattaaggactattactatagccatgatgcctccaacacacttc
aaaagcataactaagttgcttggccatagagatagaaatgttgcaaagaaggctcttggt
ctcctatgtgaaacagttagggatcatgacagggtcaggacaaagcataaatataactca
agttccagtcatcagtggcagcatctagacgagaattctcttgaatcatttcgctatatg
tgtttgaaaattgttgatttagttgatgattcgtcagatgattctgaagcctccttgaag
gtggcagcagctttggctctagaagttctggcccataagtttcctactaattattccatc
ttcaatgagtgtctaccattggttacaaaaaatatcagtatgcatgacttggcagtgtcc
tcaagctgccttcaagcaactggtgctttgatcaatgtgcttgggcctagggcactatct
gagcttcctcacataatggaaaatttgattaggatttctcatgaagcatttttatcttca
gatataaaaactacatctggtgttgatgatggcttgcctgttgtgttacaaatacccaag
gaatctcttattttatctattctagtcactttagaggctgtcgtggttaagctagggggt
ttcttgaacccatatctagaggaaattacaagaattatggtgcttcatcttgattatgcg
ttagggtctgatcagaagttgaaaataaaagctgactcagtacgaagactcatcactgag
aacatccctgttcgacttgctctaccacccatgttgaaaatattctctagtacggttgag
tctggtgattcaagtttaacagtttattttggaatgctggaaaacatgattgatagactg
gataggtcatctattggtggttaccatgctaagatttttgacttgtgcttgtatgctctt
gatctacgccgtcaacatcctgcatctgttcagaatattgatgatgtagagaaaaatgta
tacaatgcagtggttgctcttactatgaaactcacagagtccatgttcaagcctcttttc
attaggagtattgattgggcggagtcagatgtggaagatattgcatgtgcaggaaatata
cctagggctatatctttctacggcttggtaaataaacttgtggagaaccatcggtctctt
tttgttccttacttcaaatacttgctcgagggttgtgtacgtttcctaactgttgctgga
gatgcgaaggcttccggttcaacacgaaagaagaaggctaagattcaggaggggaaggac
aacagcgtgttgcttggaaactggcatctcagggctttgatactatcgtcattacataaa
tgttttctctatgatactggaagcttgaagtttcttgactcttcaaattttcaggttcta
ctgaaacccattgtttcacagcttgtcgtagatccaccgttgtctctagaagagcatccc
tacataccatccgtggaggaagtcgataatttattggttgcttgtattggccaaatggct
gtgaccggaggaagtgaccttttatggaagccgttgaattatgaggtgctgatgcagaca
cgcagtgacaaggttcggtcccgaattttgggcctgagagttgtgaaatatttggtggag
catctgagagaagaatatctggtattcctggctgaaaccattcccttcttgggtgaattg
cttgaggatgtggagctccctgttaaatctcttgcacagtcgattctcaaggatatggag
accatgagtggtgaaagcctcagccagtatctgtga
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