Prunus dulcis (almond): 117618540
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Entry
117618540 CDS
T07328
Name
(RefSeq) protein LHY-like isoform X1
KO
K12134
circadian clock associated 1
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
117618540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdul03000
]
117618540
Transcription factors [BR:
pdul03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
117618540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
DUF1345
C2orf69
Motif
Other DBs
NCBI-GeneID:
117618540
NCBI-ProteinID:
XP_034204033
LinkDB
All DBs
Position
2:complement(19403941..19407395)
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AA seq
512 aa
AA seq
DB search
MEPHSSREDLAIKARKPYTITKQRERWTHEEHNKFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFSKLEKEAHVNGVPIGQSIGIDIPPPRPKRKPSNPYPRKSSSAASICDTLHV
GAKVGKLLSSASSSRYKQVVDLEKEPLHERPFGDEKANNAENQVANCTEVFTLLQDDHCS
VSSANNNSIPSQVAFGNACTLRDATNEFHVTIKLKGNQNLKKIDAKMIVGDNGTSGAPKS
GNTNNAFHKELVQGEKFSSLIVSSLLQNPAAHAAASSTAAFWPYANAKNREDPPSMAAIA
AATVTAATAWLAVHRLLPCQIDFSCSPISMTPPVPSMDTDQAPPAKRERGESSLQIPSLQ
DQQLDSKHTEAVEAQHSNIAKANTDDKKDVASTGEVHDSNHAKSRKQQVDRSSYGSNTPS
DSEDETAAIEKNEKGKEEQKEPNTSHPAAESSHRRSRCVSNVYDSWKEVSEEGRLAFHAL
FSRDVLPQSFSLTQDLKIKGHQNDGMEDSKKS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggaaccacactcatctagggaagatttggccatcaaggcaagaaagccatatacaatt
accaagcagcgagagcgatggacacatgaggagcataataaatttcttgaagccctgaag
ctctatggccgagcatggcagcgcattgaagaacatattggaacaaagactgctgtacag
atcaggagtcatgctcagaaattcttttccaagctagagaaggaggcacacgttaatggt
gttcccataggacaatcaattggcattgatattccgcctccacgtcccaaaagaaaacca
agcaatccttatcctcgaaagtctagttcagctgcatcgatatgtgacacattgcatgtg
ggagcaaaggttggaaaacttttatcatcagcatcttcttcacgctataaacaagtagtg
gacttggagaaagaaccacttcatgagagaccttttggagatgaaaaggcaaataatgca
gaaaatcaggtagccaattgcacagaagtcttcaccttgctccaagatgatcattgctct
gtttcttctgcaaacaataattccataccctcacaggtagcattcggaaatgcttgcact
ttaagggatgcaacaaatgaatttcatgtcactattaaacttaaaggaaatcagaatttg
aagaaaattgatgccaaaatgatagttggcgataatggcacaagtggagctccgaagtca
gggaacactaataatgcttttcataaggagttggttcaaggtgagaaattttcaagtctt
attgtgtcttctctgttacaaaatcctgcagcccatgctgcggctagctccacagccgca
ttttggccttacgcaaatgcgaaaaatagggaagaccccccaagtatggcagcaattgct
gctgccactgtaaccgctgcaactgcttggttggcagtccatagactgcttccttgtcaa
attgattttagctgttctcccatctctatgacccctccagttccatcaatggatactgat
caagctcctccagccaagagagagagaggagagagttctctgcaaattccttccttgcag
gatcaacaactggactcaaaacacacggaagctgtggaagctcaacattcaaacattgca
aaggctaatactgatgataagaaggacgttgcgtcaactggagaagttcatgattcaaac
catgcaaagagcagaaaacagcaggttgaccgttcctcatatggttccaacacgccatcc
gacagcgaagacgagacagctgcaatagagaagaatgagaaagggaaggaagaacaaaaa
gagcctaatacaagtcacccagctgctgagtctagtcaccgtcgcagtagatgtgtcagc
aacgtgtatgattcatggaaagaggtctctgaagaggggcgcctggcctttcatgcacta
ttctcaagagatgtattaccccagagtttttcacttacacaggacctcaagattaagggg
catcagaatgacggtatggaagactcaaagaaaagttga
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