Prunus dulcis (almond): 117618638
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Entry
117618638 CDS
T07328
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117618638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdul03019
]
117618638
Messenger RNA biogenesis [BR:
pdul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117618638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
FapA
ATG17_like
HK_sensor_dom_bact
COG3_N
Motif
Other DBs
NCBI-GeneID:
117618638
NCBI-ProteinID:
XP_034204194
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All DBs
Position
2:15013039..15018549
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AA seq
696 aa
AA seq
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MSGFQFGSSSAASSQSTTPFSFTNPPASFPATSTGFSLGSSASPFESTTAHAVTSTSGFS
FGSSFSASTSSNPSSSSSTYPFSLDTTSSPSAPAPAPAFGSSNPSSCPAPSFGFGSGAST
ATTASSAAAPSFGFGSSAATSAPSSLFGSSASTPLFGSSPSQPLFGSSSSAPTPASASTL
FGAPSSTASSLFGATVSAASSPLIGSASASASSLFSSTSFTHSAPSSLFGSSSTVSSTPL
FSSALSSSASTTPSFPSFSSSSSAFSFPTASPLSKPPTTSISTTVTSSATASTAPSFSFA
PPTSSASQPSFGFSNAALSAAPISTAKPTSQSFSTPSAPLFSTVTTTSASSTPAASTTTQ
ASFSMPSFGATPSTSAVSSTVATASIAAPSSTAGLFTGFGVSSAAASLGTTAAASYTGFS
SMTKGSTSASSSQAQPSTTLPAFGATTLAPVAAATTSTSTAAIQTSTSLIVASTSGTTST
VSTTVSTAPKLPSEITGKTVEEIIKEWNAELQERTGKFRKQANAIADWDKRILHNRDVLL
RLEIEVAKVVETQANLERQLELIETHQQEVDKALQSMEEEAERIYKDERGLILDDEAAST
RDAMYEQAEFIERELEQVTEQIKSIIQTLNANQGGELDTNDGMAPLDVVVRILNNQLSSL
MWIDEKAEEFSSRIQKLANQGPAADRELMSPKYWMS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcttccaattcggatcctcctccgctgcttcttctcagtccactacacctttc
tcattcaccaaccctcctgcctctttccccgccacctcaaccgggttctcactcgggtcc
tccgcttccccattcgaatccactaccgcacacgccgtcacctccacctctgggttctcg
ttcggatcctccttcagtgcctccacttcctcaaacccttcctcctcctcatctacctac
cccttctccctcgacaccacctcctccccctccgcccccgctcccgcccccgcttttggg
tcctctaaccctagctcctgcccggccccttctttcggattcggatccggagcctccacc
gccaccacagcctcctctgctgcggccccttcttttggattcgggtcctcagcagcaacc
tcggctccatcatccctgtttggctcctcggcttcaactccgctgtttggttcatctcca
tcccaacccctgtttggctcatcctcatcggcgccaacgcccgcttccgcttctacttta
ttcggagcaccgtcgtccaccgcttcgtccttgttcggagcaactgtatcggcagccagt
tcacccctgattggctccgcttccgcttctgcttcatctctgtttagctcaacttccttc
acacacagcgcaccctcttccctgtttggctcatcttccacagtttcttcaacacccttg
ttcagctctgctttgtcgtcttcagcttcaaccacaccctcattcccaagcttctcgagt
tcctcttcagccttctcgttcccaacagcctcacctctttcaaagccaccaacaacctcc
atatccaccactgttacttcatcagcaacggcttcaaccgctccaagcttctcgttcgca
ccacccacttcctctgcttcacaaccgtctttcggattctccaatgccgccttatcagct
gcccccatttccaccgcaaaacccacctcgcagtccttctcaactccttctgctccattg
ttttcgacagtcaccaccacaagcgcttcttctactccagctgctagcactacaacccaa
gcctctttctctatgccgagtttcggtgcgactccttctacttctgcagtttcgagtaca
gttgcaaccgcttcaatagcagcgccttccagcacagcaggtttgtttacagggtttgga
gtgtcctccgcagctgcctctttagggactactgctgctgcttcttatactggcttttcc
tcgatgacaaaagggtcgacgtctgcttcctcatcacaagcgcaacctagcaccactttg
cctgcatttggtgccactactttggcacctgtagctgcagcgacaaccagtacaagtacc
gctgcaattcagacatcaacatcacttattgtggcttccactagtgggacaacttcaact
gtcagcactacagtatctactgcaccaaaattaccttctgagatcacagggaagactgtg
gaggagatcatcaaggagtggaatgctgagctccaagaacgtactggaaaattccgaaag
caggccaatgcaatagcagactgggacaagaggattttgcataaccgtgatgttcttctt
aggctcgagattgaagtggcgaaagtggttgaaacccaagctaacttggagcggcagcta
gagttaatcgagactcatcagcaagaggttgataaggctttgcaaagcatggaagaagaa
gctgagcgtatatacaaggacgagcgtggattgattcttgatgatgaagctgcatcgaca
agagatgcgatgtatgagcaagctgagtttatagagagagaactggagcaggtgacagaa
cagatcaaatcaattattcagaccctaaatgccaaccagggaggagaacttgatacaaat
gatgggatggctccattagatgtggttgtacgaatcttaaacaatcagctcagttcttta
atgtggattgatgaaaaggctgaagagttctcttcgcgaattcagaagcttgccaatcaa
ggtcctgctgcggatcgtgaattaatgagtccaaaatactggatgtcctga
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