Prunus dulcis (almond): 117618688
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Entry
117618688 CDS
T07328
Name
(RefSeq) transcription elongation factor TFIIS
KO
K03145
transcription elongation factor S-II
Organism
pdul
Prunus dulcis (almond)
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdul03021
]
117618688
Transcription machinery [BR:
pdul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
117618688
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
DUF2250
Zn_ribbon_Elf1
Baculo_LEF5_C
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
117618688
NCBI-ProteinID:
XP_034204260
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Position
2:22984449..22986755
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AA seq
379 aa
AA seq
DB search
MEKELLELFEAVKKSADAATSCDGGAEESQCLDALEQLKNFPVTYQLLISTQVGKRLRHL
TKHPRKKIQTFSSALIDTWKGIVIKEANKDAKNGNLERIDSLKRASPSAESPRAEKVQKT
SAVKVEKVSKAEPVEIKKVDRGVKPSSDKAYSSETVKTERKVQNANAVKTEKAASAESVK
VEKIAKEVKKPALNSCAPPKLTSMIKSNDTARDRVRGMLHEALSKVSQEADERFADYVNA
SDPIRVAVTLESVLFEHWGGSTGAQKAKYRSLIFNLKDQKNPDFRRKVLLGDIEAERLVD
MSTAEMASDQRQEENKKLEQKALFECERGGAPKATTDQFKCGRCGHRKTTYYQMQTRSAD
EPMTTYVTCVNCNNRWKFC
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagctgttggagttgttcgaagcggtgaagaaatcggcggacgccgccacg
tcttgtgacggaggagccgaggaaagccaatgccttgatgccttggagcagctcaagaat
tttcccgtcacttatcaactcctcatctcaacccaagttggaaagcgtcttcgacatctc
acaaaacatcccagaaagaaaatccagacattttcttctgccctgattgatacatggaaa
gggattgttatcaaggaagcaaacaaagatgcgaaaaacggcaacttggaaagaatagac
tctctaaaacgtgcgtctccaagtgcggagagtcccagggctgagaaggttcagaagaca
tctgctgtgaaggtagagaaggtttcaaaggcggaacctgttgagattaagaaggttgat
cgaggtgttaaaccaagctctgacaaagcttatagttctgaaactgtcaagacagagaga
aaggttcaaaatgctaatgctgtgaagacagagaaagccgcttcagcagagagtgttaag
gttgaaaagatagccaaagaagtgaagaaaccggcactgaactcctgtgctcccccaaag
ttaacatctatgatcaagtctaatgatacagcacgggacagagtaaggggaatgctgcac
gaggctttgtccaaggtttctcaggaggctgacgaaagatttgcagattatgtgaatgca
tctgatcctattagagttgctgtgactctggaatctgtgctctttgagcactggggtggt
tccaccggtgcccagaaggcaaagtatcgatctttaatcttcaacctcaaggatcaaaag
aacccagatttccgcagaaaggttctgctcggagacatcgaggcagagaggctggtagac
atgtcaacggccgaaatggcaagcgatcagaggcaggaggagaacaaaaagcttgaacaa
aaagccttgtttgagtgtgagcgtggaggagcgccaaaagctacaaccgatcaattcaaa
tgcggtcgatgcgggcacaggaagaccacctattaccaaatgcagaccaggagtgccgat
gaacctatgacaacatatgtaacatgtgtaaactgcaacaaccgttggaagttctgttag
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