Prunus dulcis (almond): 117618705
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Entry
117618705 CDS
T07328
Name
(RefSeq) protein RDM16
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117618705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdul03041
]
117618705
Spliceosome [BR:
pdul03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
117618705
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
117618705
NCBI-ProteinID:
XP_034204295
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Position
2:complement(21036358..21040976)
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AA seq
885 aa
AA seq
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MEKERSSKRHREDRDRDHHKHRSRDADEKRSSKDSDNHRHHHRSDRDSKRERSHEPRDHK
SRRERSREPSDDRDIARDQRERSYDPRGEREGSRERSRHRETKRERSEEREEYRRKRKER
ERSEGRDGDVVDFDDKKRARVSEEERKDRKRFEEDGKEVNGGQRQSRRFEDRRVKEEEDG
DYGGAVERSNELNVNASEVKKEEVGDDRLGNFQGDTTTPNGSGWMGNGAALEPTNASRIV
PETSFAPSHPLPTKVSSIYTTNENKGVSITRSHEVHGKSSTDGTSSTAGRSGNLSLDDVE
KIKKALQKQKELTEKLKKIPQLNKGANARKDASQNLGSKELKPPSATAGILHAPAPSTTG
GTAAPGVRFDSSKLPIAPAASSTSGMIAEAGLTAVPNLEAVKKAQELAASMGFRQDPQFA
PLINLFPGQVATDVAAPQKPTKAPVLRLDALGREIDELGNLVNATKPNNLSTLKVNINKQ
KKDAFQILKPELDVDPESNPFFDPMMGINKTKILRPKRMNFQFVEEGKWSRDAEHIKLKS
KFGEAQAKEQKAKQAQLAKAKAAPDINPNLIEVSERVITKEKPKDPIPEIEWWDVPLLHS
GTYNEVIDGAVVENKLKMEKITIYVEHPQPIEPPTEPAPPPPQPLKLTKKEQKKLRTQKR
LAREKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTRLEKEIRSAAAEREQAHID
RNIARKLTPAERREKKERKLFDDPNNVETIVSVYRINELSHPKARFKIDVNARENRLTGS
AVISDGMNVVVVEGGSKSIKRYAKVMLRRINWAEAVKDEEEEDDDVNNDKPANKCVLVWQ
GSVARPSFNRFSVHECMTEAAARKTFADAGVAHYWDLAVNFADDE
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagagagatcgagcaaacgccaccgcgaagatcgagacagagaccaccacaag
catcgcagccgtgacgccgatgaaaagcgatcatcaaaggactccgataaccatcgccac
caccatcgatcggaccgcgattccaagcgcgagcgctctcacgagccccgagaccacaaa
tctcgtcgcgaaaggtcacgtgagccgagcgacgaccgcgatatagcacgtgaccagcgg
gagcggtcctacgacccgaggggcgagagagaggggagccgagagaggtccaggcatcgc
gaaacgaagcgcgagaggtcggaagagagagaggaatatagacgtaagaggaaagagagg
gagaggagtgagggtagagatggggatgttgttgattttgacgataagaagagggctagg
gtttcggaggaggagaggaaagataggaagcgatttgaggaagatgggaaggaagtgaat
ggaggtcagagacagagtaggaggtttgaagaccgtcgagtgaaggaagaagaggatggt
gattatggcggagccgttgaacgcagcaatgaattgaatgtgaatgcaagtgaggttaag
aaagaggaagtgggtgatgaccggcttggtaattttcagggcgacaccaccaccccaaat
gggagtggttggatgggtaatggtgctgctctggaacctactaacgcatcaaggattgtg
cctgagacctctttcgcacctagtcatccccttcctaccaaggtatcttcgatttatacc
acaaatgaaaataagggagttagtattaccagatctcatgaggttcatggaaaatctagt
acagatggaacatcttcaactgctgggagaagtgggaatctgtctcttgatgatgtagaa
aaaattaagaaagctttacaaaagcagaaggaattgactgagaagctgaagaagattccc
cagttgaacaagggtgccaatgcaagaaaagatgctagccagaacttgggatcaaaggag
ctgaaaccaccatctgccactgctggaatactgcatgcaccggccccatcaacaactggt
ggtacagctgctccaggggtaagatttgattcatcaaaactacccattgcaccagcagct
tcgtctacaagtggcatgattgcagaagctggccttacagccgttcccaaccttgaagct
gttaaaaaagcacaggagcttgctgccagtatgggtttccgccaggacccccagtttgct
cctcttataaacttgtttccaggacaggtggcaactgatgttgctgcccctcagaagcct
actaaggcccctgttcttcgtcttgatgcccttggaagggaaatagatgaacttggaaat
ttagtgaatgcgactaaaccaaacaacctcagcactctaaaggtcaatattaacaaacag
aagaaagacgcattccaaattcttaaacctgaattggatgtggatcctgaatcaaatccc
ttttttgatccaatgatgggtattaataaaaccaagattttgaggccaaagaggatgaat
ttccagtttgtagaggaaggaaaatggtcaagagatgctgagcatataaagttgaagagt
aaatttggagaagcacaagccaaagagcaaaaggcgaagcaggcacagttggcaaaggca
aaggcagcaccagatattaatccaaatttgatagaggtatcagagagagttatcaccaaa
gaaaaaccaaaggatccaattcctgaaattgagtggtgggatgtgcccctattgcactct
ggtacttataatgaagtcattgatggcgcagtagtggaaaataaattaaagatggagaaa
atcaccatctatgttgaacatcctcagcctatcgagcccccgactgagccagcccctcca
ccgcctcaaccactgaagctgaccaagaaggagcagaaaaaactccgtacacagaaacgc
ctggccagagagaaagataggcaggagatgattagacaaggcctgatcgaacccccaaag
ccaaaagttaaaatgagtaatttgatgaaagttcttggctctgaagcaacccaagatcca
accaggcttgaaaaggagattcggagtgcagcagctgagcgtgaacaagctcatatagac
aggaatattgcacgaaagctcactcctgccgagcgccgtgagaagaaagaaaggaagctt
tttgatgacccaaataatgtggagaccatagtctcagtttacaggatcaatgaactgtca
catccaaaggcccgcttcaagattgatgttaatgcacgagagaaccggctgactggatca
gctgtgatctcagatggtatgaatgtagtggttgttgaaggcggcagcaaatctattaag
aggtatgctaaggttatgcttaggcgcataaactgggctgaagctgtaaaagatgaagaa
gaagaagatgacgatgtaaacaatgataagcctgctaacaagtgtgtgttagtatggcaa
ggaagtgttgccagaccgagcttcaatagattttctgttcacgagtgcatgactgaagct
gctgcccggaagacttttgctgatgctggcgttgctcattattgggatcttgcagtcaat
tttgcggatgatgagtag
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