Prunus dulcis (almond): 117618979
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Entry
117618979 CDS
T07328
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
117618979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdul04131
]
117618979
03029 Mitochondrial biogenesis [BR:
pdul03029
]
117618979
Membrane trafficking [BR:
pdul04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117618979
Atg1 complex
117618979
Mitochondrial biogenesis [BR:
pdul03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117618979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
117618979
NCBI-ProteinID:
XP_034204674
LinkDB
All DBs
Position
2:25718692..25722517
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AA seq
624 aa
AA seq
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MDFQNNFQLESGKLEQIVSQFLLKSLHIVLDSRIPSLHPHDRSGDLPSVPQVRKSDKWFN
LILGDRPAALENLNFWHRNVMDPMIIDIILVRGGPSSSSVDNLYVNSVEGTSVETIIERW
VVRYETPRVVAPQTGDTSASYKKTYKKSIILLRALYSYMRLLPAYRIFRQLSTSNQTYNF
DIIYKVSSLRDPFSRAEEELMEEYSFAPVEAHPGCLSLSVTYRSTLSDFNLEPAAPMPPR
IITDYVGSPATDPLRSFPSSEKGVCATSFPRGGIPPPYTVPLQRPHSWTSGIYRPPPFIH
NKPLVGSPPAYRAPSMSHDVGSPPIDTFANRVQNYRPLGGHQRNMSYDEYQLSPPFSPSP
SPSPPTYLSSGNLNPMQTRIRSGTAPVSIPLPMGSRSPRYLSPNLSDPSRNSLPPFSPRS
IRNDASSQESPSVIRAFRKLEASRAGEMHPGTSNHMVGQKVMKDSKDDSGRFSGLLSSSG
SPRVGFSRSSSRLSFQDDLDGFEFSCPFDVDDVDTSDSQVSQNLDGRKASEYTSQSLPIG
RKSHDAAVGVLVQMLRTAPPLRQDSSCYSSQSVKPEHEGGVATASGFFMPRKTSDALDEL
RSYKEMKDLLLSKSGMRVLAKEEA
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggattttcagaataattttcagctcgaatcagggaaattggaacagatagtttcccag
tttctactgaagagcttgcatattgttttggactctaggatcccttctcttcacccacat
gatcgcagtggtgacctgccatccgttcctcaagtgagaaagagtgacaagtggttcaac
ttaatactaggggaccgccctgcagctcttgaaaatttgaatttttggcacagaaatgta
atggatccaatgataattgacataatacttgttcgtggagggcctagttcttcttctgtt
gacaatctatacgtgaattctgtggaggggacatctgttgagacgattatagagaggtgg
gttgtccggtatgaaactccgcgggttgtggctccccaaactggtgacacttcggcctct
tataagaagacatacaagaagtcaatcatacttttacgtgctctttattcatatatgagg
cttcttccagcttataggatctttagacagctaagtacatctaatcagacttataatttt
gatattatttacaaggtgtcttcacttagagatccattctcaagggcggaggaggaacta
atggaggagtacagttttgctcctgtagaggctcatcctggctgcctttctttatccgtg
acttaccgttcaacactatctgatttcaatcttgagccagcagcaccaatgccaccaagg
ataattacagattatgttggtagtcctgccactgaccccctgaggtctttcccctcatca
gagaagggtgtttgtgcaacttcctttccgcgaggaggaataccaccgccatatactgtg
ccacttcaacgcccacacagctggacaagtggcatctacaggccacctccttttattcac
aataaacccctagtcggatctccacctgcatatcgtgcaccttcaatgtcacatgacgtt
ggatctcctcctattgatacatttgctaacagagttcaaaactatagacctctaggtggt
catcagagaaatatgagttacgatgagtatcagctttcacctccattttcgccatctcca
tccccatctcccccaacatacttgtccagtggaaatttaaatcctatgcaaactcgaatt
cgttcaggaactgcccctgttagtatccctcttccaatggggagcagaagccctagatac
ctgtcccccaatctttctgatccaagtagaaattctcttcctccattctcacccagaagc
ataaggaatgacgcttcctctcaagagtctccatccgtaatcagagcatttagaaaatta
gaggcttcaagggccggtgagatgcaccctggaacatcaaatcatatggttggtcagaag
gtgatgaaagacagtaaagatgattcagggcggttctcaggattgttgtcttctagtggc
tcaccacgtgttggattttctagaagctccagtagattatctttccaggatgatttggat
ggttttgagttctcatgtccttttgacgtggatgatgttgatacatcagattctcaagtc
agtcaaaatcttgatggcagaaaagcttctgagtatacatcacagtcattgccaataggc
agaaaatcacatgatgctgcggttggcgttctggttcagatgctgaggacagctccacct
ctgcgccaagattcaagttgttactcatcccagtctgtgaaacctgaacacgagggagga
gttgctacagcttctggtttctttatgcctcggaagacatctgatgcgctggacgagctc
agaagttataaagaaatgaaagaccttctactatcaaagagtggaatgagggtgcttgct
aaagaagaagcataa
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