Prunus dulcis (almond): 117619103
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Entry
117619103 CDS
T07328
Name
(RefSeq) structure-specific endonuclease subunit slx1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
pdul
Prunus dulcis (almond)
Pathway
pdul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117619103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdul03400
]
117619103
DNA repair and recombination proteins [BR:
pdul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
117619103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
T5orf172
Motif
Other DBs
NCBI-GeneID:
117619103
NCBI-ProteinID:
XP_034204839
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Position
2:complement(2237906..2240313)
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AA seq
171 aa
AA seq
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MQRLSRTFPSVKHPNPKSPKISSFPRSLPIKSEEATSNSPSKSRRSWSVYLILSTNTPIK
TYVGVTTDFSRRLKQHNGELKGGAKASCAGRPWICACLIHGFKDQSEACEFESKWKSLSR
SLPRKRKNDNKVEQVKDLSLPLLQHRQAALNRVKGLLDCTHLELDWKLGPL
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgactctcaaggacattcccttctgtaaaacacccaaaccctaaatccccaaaa
atatcatctttcccacgatcgctgccaatcaaatcagaagaagcaacatcgaactctcca
tcaaaatcaagaaggtcatggtctgtgtatctcatcctttccaccaatacccccataaag
acctacgttggtgtcaccactgatttctctcgccgtttgaaacaacataatggtgaacta
aaagggggtgcaaaagcatcctgtgctggaagaccatggatttgtgcatgcctaatacat
ggtttcaaggaccaaagtgaagcttgtgaatttgaatcaaaatggaaaagtttatcgaga
agcttgcctaggaaaagaaagaacgacaacaaggtggagcaagtaaaggatttgtcactt
ccattgctgcaacacaggcaagcagcactaaatagagttaaaggtttgctggattgcact
catttagaacttgattggaaactgggccctttgtga
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