| Entry |
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| Name |
(RefSeq) DExH-box ATP-dependent RNA helicase DExH3 isoform X1
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| KO |
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| Organism |
pdul Prunus dulcis (almond)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pdul00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117619111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pdul03019]
117619111
03012 Translation factors [BR:pdul03012]
117619111
Enzymes [BR:pdul01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117619111
Messenger RNA biogenesis [BR:pdul03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117619111
Translation factors [BR:pdul03012]
Eukaryotic type
Initiation factors
Initiation associated factors
117619111
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
2:complement(7344078..7357382)
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| AA seq |
1152 aa
MRSSRAAVGLLLKAVSNKNNACYPFFRTHTRYLALLLLHSSSSSSISNGGFLVSKRGFCG
YAAEQFSDDEYECDFEGQKASSSVANIDEWKWKMSLLLRSEKDQEIVSRDKRDRRDYEQI
SNLAKRMGLYCEIYGKVVVASKIPLPNYRPDLDDKRPQREVVIPLGLQRRVEGLLQEHLD
RVRLNSGKFTDNRGDSEHLDQLENAIPDENADSLLDGSVMEKVLQRRSLRMRNMQRAWQE
SPEGKKMLEFRKSLPAFKENERLLQAIAQNQVIVISGETGCGKTTQLPQYILESEIESGR
GAFCSIICTQPRRISAMAVAERVSAERGEPLGETVGYKVRLEGMKGKNTHLLFCTSGILL
RRLLSDRNLNGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVLMSATLNAELFSN
YFGGAPTIHIPGFTYPVKAHFLEDVLEITGYKLTSFNQIDDYGQDKMWKTQKQLVPRKRK
NQITALVEDALNKSSFESYSPRARDSLSCWTPDCIGFNLIEAVLCHICRKERPGAVLVFM
TGWEDISCLRDQLKAHPLLGDPNRVLLITCHGSMATSEQKLIFGRPPPNVRKVVLATNMA
EASITINDVVFVVDCGKAKETSYDALNNTPCLLPSWISQASARQRRGRAGRVQPGECFHL
YPRCVYHAFAEYQLPELLRTPLNSLCLQIKSLQVPSIGEFLSAALQPPEPLAVQNAIGFL
TSIGALDDNENLTSLGKYLSILPVDPKLGKMLIMGAVFHCFDPVLTIVSGLSVRDPFLLP
QDKKDLAGTAKSRFSAKDYSDHMALVRAYEGWKDAEREGSAYEYCWRNFLSAQTLQAIHS
LRKQFNYILRDAGLVDADASINNKLSHNQSLVRAIICSGLFPGIASVVHRETSMSFKTMD
DGQVLLYANSVNARYQTIPYPWLVFGEKVKVNTVFIRDSTGVSDSILILFGGSLNHGVQA
GHLRMLEGYIDFFMDPSLVDCYLKLKEELNELIQKKLQDPSLDIHKEGKYLMLAVQELVS
GDQCEGRFVFGRDSKRPKESGDNSRFTKDGTNPKSLLQTLLMRAGHSPPKYKTKHLKSNE
FRALVEFKGMQFVGKPKKNKQLAERDAAIEALAWLTHTSDNSRDEENNSPPDVTDNMLKL
LGKRRRSKRQSG |
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| NT seq |
3459 nt +upstreamnt +downstreamnt
atgcgtagttcgagagcagcagtgggtcttcttctcaaggcagtctccaacaagaataac
gcttgttatccatttttccgcacacatactcgatacctcgccttactacttctgcactct
tcttcttcttcctcaatctccaatggcggattccttgtttccaagcgtgggttttgcggc
tacgctgccgagcagttctctgacgacgagtacgagtgcgatttcgagggccaaaaggca
tcatcttcggtggcgaacattgacgagtggaaatggaaaatgagcttgctgttgcgcagc
gaaaaggaccaagagattgtatccagagataagagggataggagagactatgagcagata
tcgaacctcgccaaaaggatgggactttattgtgaaatatatgggaaagtggtggttgcc
agcaagattcctcttccaaactacaggccagatttggatgataagcggccacaaagggag
gtggttatccctcttggtttgcaaaggagggtagagggtttgctgcaggaacaccttgat
cgagtccggttaaactctggaaagttcaccgacaatagaggtgactctgagcaccttgat
cagcttgaaaatgcaattcctgatgagaatgccgattctcttctagatgggtctgtcatg
gagaaggttcttcagaggaggagtttgcggatgcgtaatatgcaaagagcttggcaggaa
tcacctgaaggcaagaagatgctagaattccgcaaatcactaccggctttcaaggagaat
gaaaggttgctgcaagcaattgcacaaaatcaggtaatagtgatttctggagagactgga
tgtggtaagaccactcaacttcctcaatatatactagagtcagaaatagaatctggccgt
ggagcattctgtagcatcatttgtacacagcctcgaagaatatctgctatggctgttgca
gaaagagtgtcagcagagaggggagagcctcttggtgaaacagttggttataaagttcga
ttggagggaatgaagggaaaaaatacccatctgcttttctgtaccagtggtattttactt
cgccgtctgttgagtgatcgcaacctgaatggtataacccatgttttcgttgatgagatt
catgagcgaggcatgaatgaagacttcttattgattgtgttgaaggatctgcttccacgc
cgtcgggatttaagattggttttaatgagtgccactctgaatgctgagctattttcaaat
tattttggaggagcaccaacaattcacattccgggctttacatatccagtgaaagcacac
tttttagaagatgtacttgaaataactgggtataagttgacctctttcaaccaaattgat
gattatggccaagacaaaatgtggaaaacacagaagcagttagtgcctcgaaaaaggaaa
aaccagattactgctctagttgaggatgctcttaataaatcaagctttgagagttacagc
cccagggcgcgtgattcactatcatgttggacacctgattgcataggatttaatttaatc
gaggcagttttatgccatatatgtcgaaaggaacgaccaggtgctgttctagtgttcatg
actgggtgggaggatatcagctgtttgagggatcaacttaaggcccatccccttttaggt
gatcctaacagggttttgctaataacttgccatgggtcaatggcaacatccgaacagaaa
ctcatatttggaagaccacctcctaatgttcgtaaagtagttcttgctacaaatatggca
gaagcaagcattacaatcaatgatgtggtttttgtcgttgattgtggaaaagcaaaagag
acctcatatgatgctttgaataatacaccttgtctactaccttcttggatatcgcaagca
tctgctcggcaaagaaggggcagggctggtcgggtgcagccaggcgaatgcttccacctt
taccccagatgtgtttatcatgcttttgcggaatatcaacttcctgaacttctcagaact
cctttaaactctctctgcttgcaaattaaaagtctgcaggttcctagtataggggaattc
ttgtcagctgccttgcagccaccggaaccacttgctgttcaaaatgccattggctttctt
acatcgattggggcattagatgataatgaaaatttgacaagtctcggaaaatatttgtca
atacttccagtagatcccaaactagggaaaatgctgattatgggtgccgtgtttcattgc
tttgatcctgttcttacaatagtgtctgggcttagcgtcagagatcctttccttttgcct
caagacaaaaaggatttagcagggacagcaaaatctagattctctgcaaaagattacagt
gatcatatggctcttgttcgtgcatatgaaggatggaaagatgcagaacgagaaggatca
gcgtatgaatactgctggagaaatttcctttctgcccaaacacttcaggctattcattct
cttcggaagcagtttaactacattttgagagatgctggcttggtggatgcagatgcaagc
attaacaacaagctaagtcacaaccagtccttggttcgtgcaatcatatgttctggactt
ttccctggaatagcgtctgtagtgcaccgagagacatccatgtctttcaaaacgatggat
gatggccaggttttactatatgctaattctgtgaatgcacgttaccaaacaattccctac
ccctggctggtctttggtgaaaaagtaaaggtcaatactgttttcatacgtgattccacc
ggtgtatccgattcaatactgatcctttttggtggttccttgaaccatggggtccaggct
gggcatttgagaatgttggaaggttatattgacttcttcatggatcctagtttggtggac
tgctatttgaagcttaaggaagaacttaatgagcttattcaaaagaagcttcaagatcct
agccttgatattcacaaggaagggaagtaccttatgcttgctgttcaagagctagtatcc
ggagatcaatgtgaaggaagatttgtatttggccgtgacagcaagaggccaaaggagtct
ggtgataacagcagattcacaaaagacggaaccaatcctaagagtttgctacaaactctg
ttgatgagagcaggacactcccctccaaaatataaaacaaagcaccttaagtcgaatgaa
ttcagagcattggtggagttcaagggcatgcaatttgttgggaaacccaagaaaaataag
cagcttgcagaaagggatgctgctatagaagcactggcctggttgactcacacctcagac
aatagtcgtgatgaagagaacaactcccctcctgatgtcactgacaacatgctgaaactt
cttgggaaacgcagaagatcaaaacgtcagtctggttga |
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